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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL17675; SV 1; linear; genomic DNA; STD; PRO; 1062 BP.
XX
PA   AM286690.1
XX
DE   Alcanivorax borkumensis SK2 uroporphyrinogen decarboxylase
XX
OS   Alcanivorax borkumensis SK2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=393595;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1062
FT                   /organism="Alcanivorax borkumensis SK2"
FT                   /strain="SK2"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AM286690.1:2539837..2540898)
FT                   /transl_table=11
FT                   /gene="hemE"
FT                   /locus_tag="ABO_2227"
FT                   /product="uroporphyrinogen decarboxylase"
FT                   /function="catalyzes the sequential decarboxylation of the
FT                   four acetyl side chains of uroporphyrinogen to yield
FT                   coproporphyrinogen (uroporphyrinogen-iii =
FT                   coproporphyrinogen + 4 co(2))"
FT                   /EC_number="4.1.1.37"
FT                   /note="identified by sequencesimilarity; putative InterPro:
FT                   Uroporphyrinogen decarboxylase (URO-D)"
FT                   /note="High confidence in function and specificity"
FT                   /db_xref="GOA:Q0VMC3"
FT                   /db_xref="InterPro:IPR000257"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0VMC3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL17675.1"
FT                   /translation="MTFAPLQNDRFLRALNRETVDRTPIWMMRQAGRYLPEYRAAREHA
FT                   GSFMDLCKNADLACEVTLQPLERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKV
FT                   VRTEADVAALPIPDAESDLGYVMNAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSS
FT                   KDFRHLKAMVYSQPELAHAMLDKLAQSVTGYLNAQIRHGAQAVQIFDTWGGALSAEAYK
FT                   EFSLRYMQQIVDGLIRDNEGRKVPVILFTKNGGLWLESMAATGCDALGLDWTINIGDAR
FT                   RRVGDKVALQGNMDPAVLYASPQAIRAEVKRILDDFGDHPGHIFNLGHGITPQVDPEHA
FT                   KVFIEAVVELSQK"
XX
SQ   Sequence 1062 BP; 225 A; 254 C; 325 G; 258 T; 0 other; 756519894 CRC32;
     atgactttcg ctcccctgca aaatgatcgc tttcttcgtg cactcaaccg cgagacggtg        60
     gatcgcacgc ctatctggat gatgcgccaa gcggggcgtt acctaccgga ataccgggct       120
     gctcgcgagc atgcgggttc atttatggat ctgtgcaaga atgctgatct ggcctgtgag       180
     gtgacgttac agccattgga gcgttacccg ttggacgcgg ctattctgtt ctccgacatc       240
     ctgactattc ctgatgctat ggggctgggg ctgtattttg agacgggaga ggggcccaaa       300
     ttcagaaaag tggtgcgaac cgaagcggat gtggccgcac tgccgatacc ggatgcagaa       360
     tccgatctgg gctacgtgat gaatgcggtg agtactattc gtggtgctct taatggacgt       420
     gtgccgctga tcggtttttc cgggagcccc tggacgctgg cgacctacat ggtagagggc       480
     ggctccagca aagatttccg tcaccttaaa gcgatggtgt acagccagcc cgagctggct       540
     catgccatgc tcgacaaact ggctcagtcc gtgacaggtt acctgaatgc acagatccgt       600
     catggagccc aggctgtgca aatttttgat acttggggcg gggcgctgtc ggcggaagcc       660
     tataaagaat tttccctgcg ttatatgcag caaatcgtgg atggcctgat tcgtgataat       720
     gagggtcgca aggtaccggt gatcctgttc actaaaaacg gtggcctgtg gctggaatcc       780
     atggctgcca cgggctgtga tgctttaggg ctggactgga cgattaatat cggtgacgcg       840
     cgccgtcgtg tgggtgacaa ggtcgcccta cagggaaata tggatccggc agtgctgtat       900
     gcctcgccgc aggcgattcg ggctgaagtg aaacgtatcc tcgatgattt tggtgatcat       960
     cctgggcata tttttaatct agggcacggc atcaccccgc aagtggatcc ggagcacgct      1020
     aaggtcttta ttgaagctgt agtggaattg agtcagaaat aa                         1062
//
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