EBI Dbfetch

ID   CAL17634; SV 1; linear; genomic DNA; STD; PRO; 1062 BP.
XX
PA   AM286690.1
XX
DE   Alcanivorax borkumensis SK2 alanine racemase, catabolic
XX
OS   Alcanivorax borkumensis SK2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=393595;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1062
FT                   /organism="Alcanivorax borkumensis SK2"
FT                   /strain="SK2"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AM286690.1:2496009..2497070)
FT                   /transl_table=11
FT                   /gene="dadX"
FT                   /locus_tag="ABO_2186"
FT                   /product="alanine racemase, catabolic"
FT                   /function="provides the d-alanine required for cell wall
FT                   biosynthesis (by similarity)."
FT                   /EC_number="5.1.1.1"
FT                   /note="identified by sequence similarity;putative InterPro:
FT                   Alanine racemase catalytic activity: l-alanine = d-alanine.
FT                   cofactor: pyridoxal phosphate (by similarity). pathway:
FT                   d-alanine branch of peptidoglycan biosynthesis; first
FT                   step."
FT                   /note="High confidence in function and specificity"
FT                   /db_xref="GOA:Q0VMG4"
FT                   /db_xref="InterPro:IPR000821"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0VMG4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL17634.1"
FT                   /translation="MRGTRVEIRLAALRNNALRAAELAGDAQVFAMVKANGYGHGLLLA
FT                   AETMLDSVSGLGVAVLDEARTLREHGIALPILVAEGFFDAEELEAAARLSLEVVVHSLW
FT                   QVELLLANPCPVRIWLKVNAGMNRLGLRPNEALSAAARLSQAGNAPVGVMSHFACADMD
FT                   EDIHSEKQLLLAGSVAEQLQLPLSASNSAALLRYPRAHAQRVRPGIMLYGSSPFNWQTA
FT                   AELGLQVSHRFSARLIAINAVEAGESVGYGATWTASDPRQIGVVAVGYGDGYPRHAPSG
FT                   TPVAVNGVVTTLVGRVSMDMITIDVTGLSASVGDEVELWGDVVDVDDVARACGTISYEL
FT                   FCQITQRPERTIV"
XX
SQ   Sequence 1062 BP; 200 A; 253 C; 366 G; 243 T; 0 other; 2919648753 CRC32;
     atgagaggca cgcgcgtaga aattcgtctc gccgcgctca ggaacaacgc actccgcgca        60
     gcggagttgg ccggtgatgc tcaagtgttt gctatggtta aggctaatgg ttacggccat       120
     gggctgttgc tggcggcaga gaccatgctc gatagcgtgt cgggtttggg cgtggcagtg       180
     ctggacgagg cgcggacgct gcgtgagcat ggtatagcct tgccaatatt ggttgccgaa       240
     gggttcttcg atgcggaaga gctagaggca gcggcgcgac tctcgcttga ggtggtggtg       300
     cattccttat ggcaagtgga gttgctgctg gcgaacccgt gcccggtacg tatttggttg       360
     aaagtgaatg cggggatgaa tcgtctgggt ttgcgcccga atgaagcttt gagcgcggct       420
     gcacggttaa gccaagcagg taacgctccg gtcggcgtga tgagccattt tgcctgtgcg       480
     gatatggatg aggatatcca ttccgaaaaa cagctactgc tggcgggaag tgtagcagag       540
     caattgcagc tgccgctgtc tgcttcaaac tctgctgctt tactgcgtta ccctcgtgcc       600
     catgcccagc gagtgcggcc ggggatcatg ttgtatggct catcgccgtt taactggcag       660
     actgctgcgg aacttggtct gcaagtcagc catcgcttca gtgcacgctt gatcgccatt       720
     aatgctgttg aggctggtga aagcgtgggt tatggcgcta cctggactgc ctcagatcca       780
     cgacaaatcg gggtggtggc agtgggctat ggcgatggct acccacgcca cgcgcccagc       840
     gggacgccgg tagcggtgaa cggggtcgtt acgacgctgg tggggcgagt ttccatggat       900
     atgatcacca tcgatgtgac cggcttgagt gccagcgtgg gggatgaggt ggagttgtgg       960
     ggtgacgtgg tcgatgtgga tgacgtggcc cgtgcctgtg ggacaatcag ctatgagctg      1020
     ttctgccaga tcacgcaaag accggaacgc actatcgtct ga                         1062
//