EBI Dbfetch

ID   CAL16457; SV 1; linear; genomic DNA; STD; PRO; 615 BP.
XX
PA   AM286690.1
XX
DE   Alcanivorax borkumensis SK2 LexA repressor
XX
OS   Alcanivorax borkumensis SK2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=393595;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..615
FT                   /organism="Alcanivorax borkumensis SK2"
FT                   /strain="SK2"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AM286690.1:1146410..1147024)
FT                   /transl_table=11
FT                   /gene="lexA"
FT                   /locus_tag="ABO_1009"
FT                   /product="LexA repressor"
FT                   /function="Represses a number of genes involved in the
FT                   response to DNA damage (SOS response), including recA and
FT                   lexA. Has been shown to bind to the 16 bp palindromic
FT                   sequence 5'-ctgt-at(4)-acag-3'. In the presence of
FT                   single-stranded DNA, recA interacts with lexA causing an
FT                   autocatalytic cleavage which disrupts the DNA-binding part
FT                   of lexA, leading to derepression of the SOS regulon and
FT                   eventually DNA repair. Catalytic activity: hydrolysis of
FT                   ala-|-gly bond in repressor lexA."
FT                   /EC_number="3.4.21.88"
FT                   /note="(lexA-1) identified by sequence similarity; putative
FT                   InterPro: LexA DNA binding domain"
FT                   /note="High confidence in function and specificity"
FT                   /db_xref="GOA:Q0VQU1"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0VQU1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL16457.1"
FT                   /translation="MSSKLTDRQQQVLDCIRECLKDNGMAPTRAEIADIMGFQSKNAAS
FT                   DHLRALERKGYIKLHSDRSRGIQLLDHAYWGEEELPVVGKVAAGIPIEAIENVERTVPV
FT                   PQGLFKQRPTYLLKVQGDSMVDAGIFDGDLIAVRKSNVARSGEIVVARIDEEVTVKTLK
FT                   LNKSSATLLPANEAYEPIKVPADQLIIEGIFVGLIRDPNSF"
XX
SQ   Sequence 615 BP; 164 A; 166 C; 151 G; 134 T; 0 other; 1990397187 CRC32;
     atgagcagca aacttaccga ccggcagcaa caagtcctcg actgcatccg tgaatgtctt        60
     aaggacaacg gcatggcccc tacccgtgca gagattgccg acattatggg attccaatcc       120
     aagaatgcgg cctcagacca tctccgtgcc ttagagcgca aaggctatat caaacttcac       180
     agtgatcgct ctcgcggaat ccaactactt gatcatgcct actggggtga agaggaactg       240
     cccgtcgtcg gtaaagtggc tgcggggatc cccattgaag ccatcgagaa cgtggaacga       300
     accgtgccag taccccaagg cctgtttaaa cagcgcccca cctatctatt aaaggtgcaa       360
     ggcgacagca tggtggatgc gggcattttc gatggcgacc taattgccgt gcgcaaatcc       420
     aatgtggccc gttccggtga aatcgttgtc gcgcgcattg acgaagaagt cacggtaaag       480
     accttaaagt tgaataaatc cagcgccaca ctactcccgg ctaacgaagc ctatgaaccg       540
     atcaaagtgc ccgctgatca acttattatt gaaggcattt ttgtggggct aattcgtgac       600
     ccaaactctt tttaa                                                        615
//