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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAL16044; SV 1; linear; genomic DNA; STD; PRO; 1326 BP.
XX
PA   AM286690.1
XX
DE   Alcanivorax borkumensis SK2 UDP-N-acetylmuramoylalanine--D-glutamate ligase
XX
OS   Alcanivorax borkumensis SK2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=393595;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1326
FT                   /organism="Alcanivorax borkumensis SK2"
FT                   /strain="SK2"
FT                   /mol_type="genomic DNA"
FT   CDS             AM286690.1:653512..654837
FT                   /transl_table=11
FT                   /gene="murD"
FT                   /locus_tag="ABO_0596"
FT                   /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
FT                   /function="D-glutamic acidadding enzyme"
FT                   /EC_number="6.3.2.9"
FT                   /note="identified by match to PFAM protein family
FT                   HMMPF01225 InterPro: Cytoplasmic peptidoglycan synthetases
FT                   N-terminal"
FT                   /note="High confidence in function and specificity"
FT                   /db_xref="GOA:Q0VS04"
FT                   /db_xref="InterPro:IPR005762"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0VS04"
FT                   /inference="protein motif:HMMPFAM:HMMPF01225"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAL16044.1"
FT                   /translation="MAKDGFDLVIGLGVTGRSVIRYLTDQGMPVRAIDTRAEPVGLDAL
FT                   CADFPDLKVHTGGFKKGWMGKARRLIVSPGVAVSTPAIAEQVVDGKEVIGDIELFARAA
FT                   SEPLVAITGSNAKSTVTTLLGQVADACGMNPGIGGNLGVPALELLDDQARLYVLELSSF
FT                   QLETTYSLSAEVATVLNVSQDHLDRYASFADYLAAKQRVYDGCQVAVWNRDDLATRPPA
FT                   TVARQISFGAHPEADYRLDSENGQLLCRGEPLLSLSELALTGHHNAMNILSVLAISDAL
FT                   SLNRDKALATVKTFTGLPHRCQLVAESGGVRWFNDSKATNVGATLAALTGIGESIEGKV
FT                   ILVAGGLGKGQDFSPLAEPARQYLRAALLMGEDRTTVAQGMSAAPCELVADMAVAVRRA
FT                   HALAQPGDAVLLSPACASFDQYSGFAARGDDFTTRAQELCHD"
XX
SQ   Sequence 1326 BP; 252 A; 361 C; 424 G; 289 T; 0 other; 118589372 CRC32;
     atggcgaaag acgggtttga tctggtcatt ggcctgggtg taacaggccg ctccgtgatc        60
     cgctatctaa cggatcaggg tatgcccgtg cgcgccatag atacccgtgc tgaaccggtc       120
     ggcctagacg ccctgtgcgc agactttccg gacctaaaag tgcataccgg tggcttcaag       180
     aaaggctgga tgggcaaggc ccgtcgtctg atcgtgagcc cgggtgtggc ggtgtccacg       240
     cccgccattg ccgagcaggt agtggatggc aaagaagtga tcggcgacat tgagctgttc       300
     gcccgtgcgg ccagtgagcc gctggtggcc atcaccggtt ccaatgccaa aagcacagtg       360
     acaacgctgc tggggcaagt ggcagatgcc tgtgggatga acccaggtat cggcggcaac       420
     ctgggtgtgc cagcgctgga attgctggac gaccaagcgc ggttgtacgt tcttgagttg       480
     tccagctttc agttggaaac cacttacagc ttgagtgcgg aagtggccac agtgttaaac       540
     gtgtcccagg atcatttgga ccgttacgcc agctttgcag attacctagc ggctaagcag       600
     cgcgtctatg acggctgcca ggtggcggtc tggaatcgtg atgatttggc aacccgtccg       660
     ccggctacgg tggcccggca gatcagtttt ggcgcccacc cggaagcgga ttaccggcta       720
     gatagcgaaa acggtcaact actgtgccga ggcgagccct tattgtcgct gtcagagctg       780
     gcgctcaccg gccaccataa tgccatgaat attctctcgg ttctggcgat cagtgatgcg       840
     ctgtctttga atcgggataa agcactggcc acagtgaaaa cctttactgg gctgccgcat       900
     cgttgccagc tggtcgccga atcaggtggt gtgcgctggt ttaacgattc gaaggccacc       960
     aatgtgggcg ccaccttggc ggcgctgacc gggatcggtg aaagcatcga gggcaaagtg      1020
     attctggtcg ctggtggcct aggcaaaggg caggatttct ctccgctggc cgagcctgcc      1080
     cggcagtatt tacgtgccgc cctattgatg ggtgaagacc gtactaccgt ggcacagggc      1140
     atgtctgcgg cgccctgtga actggtggca gatatggctg ttgcggtacg tcgcgcccat      1200
     gccctggcac agccgggcga tgccgtttta ctgtcaccgg cctgtgcctc gtttgatcag      1260
     tacagcggtt ttgctgcccg cggcgatgat ttcaccaccc gtgcccagga gttgtgccat      1320
     gactga                                                                 1326
//
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