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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAK06766; SV 1; linear; genomic DNA; STD; PRO; 1650 BP.
XX
PA   AM236080.1
XX
DE   Rhizobium leguminosarum bv. viciae 3841 putative choline dehydrogenase
XX
OS   Rhizobium leguminosarum bv. viciae 3841
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
OC   Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=216596;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1650
FT                   /organism="Rhizobium leguminosarum bv. viciae 3841"
FT                   /strain="3841"
FT                   /mol_type="genomic DNA"
FT                   /country="United Kingdom"
FT   CDS             complement(AM236080.1:1333279..1334928)
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="RL1270"
FT                   /product="putative choline dehydrogenase"
FT                   /EC_number="1.1.99.1"
FT                   /note="similarity:fasta; with=UniProt:BETA_RHIME
FT                   (EMBL:SME591785); Rhizobium meliloti (Sinorhizobium
FT                   meliloti).; betA; Choline dehydrogenase (EC 1.1.99.1) (CHD)
FT                   (CDH).; length=549; id 88.160; 549 aa overlap; query 1-549;
FT                   subject 1-549"
FT                   /note="similarity:fasta; with=UniProt:BETA_AGRT5
FT                   (EMBL:C97460); Agrobacterium tumefaciens (strain C58/ATCC
FT                   33970).; betA; Choline dehydrogenase (EC 1.1.99.1) (CHD)
FT                   (CDH).; length=549; id 88.160; 549 aa overlap; query 1-549;
FT                   subject 1-549"
FT                   /db_xref="GOA:Q1MJU4"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q1MJU4"
FT                   /inference="similar to sequence:INSDC:SME591785"
FT                   /inference="similar to sequence:INSDC:C97460"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAK06766.1"
FT                   /translation="MQADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQM
FT                   PAALAWPMSMKRYNWGYLSEPEANLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNR
FT                   WEELGASGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQ
FT                   AGFETTEDYNGSKQEGFGLMEQTIFGGRRWSAANAYLKPALKRDNVKIVYGLAQRIVIE
FT                   DGRATGVEIERNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADR
FT                   PGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSRGGLGASNQFEACAF
FT                   LRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVSLRSADPKAD
FT                   PVLRFNYMSHAEDWEKFRHCVRLTREIFGQSAFHDYRGPEIQPGEGVQSDEEIDAFLRE
FT                   HLESAYHPCGTCRMGAKDDPMAVVDPQTRVIGIDGLRVADSSIFPHVTYGNLNGPSIMT
FT                   GEKAADHILGKQPLARSNQEPWINPRAAVSDR"
XX
SQ   Sequence 1650 BP; 317 A; 515 C; 531 G; 287 T; 0 other; 3872212415 CRC32;
     atgcaagcag atttcgtcat catcggctcg ggctccgccg gctccgccct cgcctaccgt        60
     ctgtcggaag gcggcaagaa cagcgtcatc gtcatcgagg cgggtggcag cgattttggg       120
     ccgttcatcc agatgccggc agcccttgcc tggccgatga gcatgaagcg ctataactgg       180
     ggttatctgt ccgagccgga ggcgaacctc aacaaccggc gcatcaccgc gccgcgcggc       240
     aaggtgatcg gcggctcctc gtcgatcaac ggcatggtct atgtgcgcgg tcatgccgag       300
     gatttcaatc gctgggagga gctcggcgcc agcggctggg cctatgccga cgtgcttccc       360
     tatttcaagc ggatggaaca ttcgcatggc ggcgaagaag gctggcgcgg caccgacggg       420
     ccgctgcacg tccagcgcgg cggtttcacc aatccgctct tccaagcctt cgtcgaggcc       480
     ggcaaacagg ccggcttcga gacgacggaa gattacaacg gcagcaagca ggaaggcttc       540
     gggctgatgg agcagaccat cttcggcggc cgccgctggt ctgccgccaa cgcctatctg       600
     aaaccggcgc tgaagcggga caatgtcaag atcgtctacg gcctggcgca gaggatcgtg       660
     atcgaggacg ggcgggcgac cggcgtcgag atcgaacgca acggcaggat cgaggtggtg       720
     aaggcgaacc gcgaggtgat cgtctcggcc tcctcgttca attcgccgaa gctgctgatg       780
     ctctcgggta tcggtcccgg ccaacatctg caggacatgg gcattgcggt gaaggccgac       840
     cggccgggcg tcggcgccaa cctgcaggac catatggaat tttatttcca gcaggtcagc       900
     accaagccgg tgtcgctcta ttcctggctg ccgtggttct ggcagggggt ggcgggcgcc       960
     cagtggctgc tctcgcgcgg cgggctcggc gcctccaacc agttcgaagc ctgcgccttc      1020
     ctgcgctcgg cacccgggct gaagcagccc gatatccagt atcatttcct gccggtggcg      1080
     atcagctatg acggcaaggc ggcggcgaaa agccacggct tccaggttca tgtcggctat      1140
     aatctgtcga aatcgcgcgg cagcgtgagc ttacgctccg ccgatcccaa ggccgatccg      1200
     gtgctgcgct tcaactatat gagccatgcc gaggattggg aaaaattccg ccactgcgtg      1260
     cggctcaccc gcgaaatctt cggccagagc gcctttcacg actatcgcgg gccggagatc      1320
     cagccgggcg aaggcgtgca aagcgacgaa gagatcgacg ccttcctgcg tgaacatctg      1380
     gaaagcgcct atcacccttg cggcacctgc cggatgggcg ccaaggacga tccgatggcg      1440
     gtggtcgatc cacaaacacg ggtgatcggc atcgatggct tgcgcgtcgc cgacagctcg      1500
     atcttcccgc atgtcaccta tggcaacttg aacggcccct cgatcatgac cggagagaaa      1560
     gcggccgacc atatcctcgg caaacagccg ctggcacgct cgaaccagga gccgtggatc      1620
     aatccgcgcg cggccgtcag cgacagatag                                       1650
//
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