spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAK04282; SV 1; linear; genomic DNA; STD; VRT; 1590 BP.
XX
PA   BX547927.10
XX
DE   Danio rerio (zebrafish) tyrosyl-tRNA synthetase
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1590
FT                   /organism="Danio rerio"
FT                   /chromosome="19"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-211"
FT                   /clone="CH211-194E15"
FT   CDS             complement(join(BX547927.10:18489..18599,
FT                   BX547927.10:19172..19313,BX547927.10:19408..19601,
FT                   BX547927.10:20648..20748,BX547927.10:20834..20969,
FT                   BX547927.10:21817..21902,BX547927.10:21984..22119,
FT                   BX547927.10:22203..22295,BX547927.10:24052..24132,
FT                   BX547927.10:25887..26016,BX547927.10:26173..26348,
FT                   BX547927.10:26967..27113,BX547927.10:27850..27906))
FT                   /gene="yars"
FT                   /locus_tag="CH211-194E15.4-001"
FT                   /standard_name="OTTDARP00000016231"
FT                   /product="tyrosyl-tRNA synthetase"
FT                   /note="match: proteins: Sw:O14055 Sw:P54577 Sw:Q29465
FT                   Sw:Q6TGS6 Sw:Q91WQ3 Tr:Q8SRV7 Tr:Q9VV60"
FT                   /db_xref="GOA:Q6TGS6"
FT                   /db_xref="InterPro:IPR002307"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6TGS6"
FT                   /db_xref="ZFIN:ZDB-GENE-030425-2"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAK04282.1"
FT                   /translation="MGEQLSPDEKFQLITRNLQEVLGEERLKEILKERELKVYWGTATT
FT                   GKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVKYYEQVIKAM
FT                   LESIGVPLDKLKFVKGTDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSG
FT                   LLYPGLQALDEEYLKVDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSK
FT                   MSSSEEESKIDLLDKNQDVKKKLKKAFCEPGNVENNGVLSFVKHVLFPLHSEFVIKRDP
FT                   KFGGDKVYTDFEEVEKDFAAEQIHPGDLKASVELALNKLLDPIRKKFESPELKKLTSSA
FT                   YPEPSKNKGGAKGNPKQTTDDDEVIPSRLDIRVGKVISVEKHPDADSLYLEKIDVGEEQ
FT                   PRTVVSGLVAYITEEQLQDRLVVLLCNLKPQKMRGIESQAMVLCASIEGEPRKVEPLDP
FT                   PEGSAAGDRVYVEGYESGKPDDELKPKKKVFEKLQVDLKISGEFVAQWKEQNLMTKLGR
FT                   ITCKTLKGGNIS"
XX
SQ   Sequence 1590 BP; 481 A; 319 C; 428 G; 362 T; 0 other; 3713155220 CRC32;
     atgggagagc agctgagtcc tgatgagaag ttccagctca tcaccagaaa ccttcaggag        60
     gttcttggtg aggagaggtt gaaggagatc ctgaaggagc gggaactgaa ggtttactgg       120
     ggaacagcga ctacaggcaa accccatgtt gcttactttg tccccatgtc aaaaattgct       180
     gacttcctga aggcgggctg tgaggtgacc atcctctttg ctgatctcca tgcttatctg       240
     gataacatga aggctccctg ggagctgctg gagctccggg tgaagtatta tgagcaggtc       300
     atcaaggcca tgttggagag cattggagtt cctcttgaca aactcaaatt tgtcaaaggc       360
     acagattatc agctcagcag agaatacact ctggatgttt accgactgtc atccatggtc       420
     actgaacacg atgcaaagaa agcaggggca gaggtggtca aacaggttga gcatcctctt       480
     ctcagtggtc tgctgtatcc tggactacag gcactggatg aggaatacct aaaagtagat       540
     gctcagtttg gtggtgtgga ccagaggaag atcttcacat tagctgagaa gtacctgcct       600
     tcccttgggt acaccaaacg tagccacttg atgaacccaa tggttccagg actgactggg       660
     agcaagatga gctcctcaga ggaggaatcc aagattgacc tgctagacaa gaaccaagat       720
     gtgaagaaga agctgaagaa ggcgttctgt gagcctggaa atgtggagaa taatggagtt       780
     ctgtcttttg tcaaacacgt gcttttccct ctgcactcag agtttgtgat taaaagagat       840
     ccaaagtttg gaggtgacaa agtctacaca gattttgagg aagtggagaa ggactttgct       900
     gcagagcaaa ttcatccagg tgacctgaag gcttcagtag aattggctct taacaaactg       960
     ttggacccta tcaggaagaa gtttgagagc cctgagttga aaaaactgac atcatctgct      1020
     tacccagaac catctaaaaa caaaggagga gcaaagggca accctaaaca aaccacagat      1080
     gacgatgagg tcatcccatc cagattagac atcagagtgg gaaaagtcat cagtgtagaa      1140
     aagcatccag atgcagactc actatattta gagaagattg atgtgggtga agaacagccg      1200
     cggactgtag tgagtggact ggtggcttat atcacagagg aacagcttca ggaccgactc      1260
     gttgtgctgc tctgcaactt aaagccccag aagatgaggg ggattgaatc tcaagcaatg      1320
     gtgctttgtg cttcaatcga aggagagccc aggaaagtgg agcctttgga tccaccagaa      1380
     ggatctgcag caggagatcg tgtttacgta gagggctatg aatctggcaa accagacgat      1440
     gaattgaaac caaagaaaaa ggtgtttgag aagttacagg ttgatctgaa gatctccggc      1500
     gagtttgttg cacaatggaa agagcaaaat ctgatgacca aacttggacg aatcacctgc      1560
     aaaacactta aaggtggaaa tatcagctag                                       1590
//
spacer
spacer