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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAI87301; SV 1; linear; genomic DNA; STD; PRO; 1149 BP.
XX
PA   CR954246.1
XX
DE   Pseudoalteromonas haloplanktis TAC125 Putative ribosomal RNA small subunit
DE   methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA
DE   m2G966 methyltransferase)
XX
OS   Pseudoalteromonas haloplanktis TAC125
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=326442;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1149
FT                   /organism="Pseudoalteromonas haloplanktis TAC125"
FT                   /chromosome="I"
FT                   /strain="TAC125"
FT                   /mol_type="genomic DNA"
FT   CDS             CR954246.1:2383789..2384937
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="rsmD"
FT                   /locus_tag="PSHAa2245"
FT                   /product="Putative ribosomal RNA small subunit
FT                   methyltransferase D (rRNA
FT                   (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
FT                   methyltransferase)"
FT                   /function="3.2.3.2 : rRNA modifications"
FT                   /EC_number="2.1.1.52"
FT                   /note="Evidence 2b : Function of strongly homologous gene;
FT                   PubMedId : 11929612; Product type e : enzyme"
FT                   /db_xref="GOA:Q3IHQ6"
FT                   /db_xref="InterPro:IPR007848"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3IHQ6"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAI87301.1"
FT                   /translation="MTMQAQLGDKTFTLERFPLDQKNRSLQAWDSADEYLIDYVSEHHP
FT                   DCRSLLILNDSFGALSCYFSHKQLTVCSVNDSYISHQAAAYNLAENKIPAITFSQLDSL
FT                   SALPEQVDLVLIKVPRTLGFLQYQLSELSEVLAPGTPVIAAAKTKDVHNSTIKAFEQFI
FT                   GETKTSLAVKKSRLIISHAQGGYKAADFPVNWPLEGTDFTISNHANVFSRDSLDIGARF
FT                   FFNYLPETNKAKSIIDLGCGNGVVGLMALSRCPNANITFVDESYMAVESARLNVELNME
FT                   AKYEQCSFVENDCLSGFERDSVDMVLCNPPFHQAQAVTDHIAWQMFKEAKDTLKEGGEL
FT                   RIIGNRHLDYHDKLNRMFGNCKLLGSNKKFVVLSATKNTGML"
XX
SQ   Sequence 1149 BP; 348 A; 220 C; 236 G; 345 T; 0 other; 2622311238 CRC32;
     atgaccatgc aagcacagct cggcgataaa acctttactc ttgaacgctt tcctttggat        60
     caaaaaaacc gcagcttaca agcttgggat tcagccgacg aatatttaat cgactatgtt       120
     agcgaacatc atcctgattg tcgctctttg ctgattttaa atgatagttt tggcgcgctt       180
     tcttgttatt ttagccacaa gcaattaacg gtttgttcag taaacgactc ttatattagc       240
     caccaagcag cagcttataa cttagcagag aataaaatac ctgctattac ctttagccag       300
     ctcgatagtt tatcggcttt acctgaacaa gttgatttgg tacttattaa agtaccacgc       360
     acattaggct ttttacagta tcaactgtct gagcttagcg aagtgcttgc ccccggaacg       420
     cctgttattg ccgcggcaaa aacaaaagat gtgcataatt caacaattaa agcgtttgag       480
     cagtttattg gcgaaacaaa aacaagttta gcggttaaaa agtcacgctt aattataagc       540
     cacgcacaag gtgggtataa agccgctgat tttccggtaa attggccact tgaaggcact       600
     gactttacta ttagtaacca tgcaaatgtg ttttcgcgtg attcattaga tattggcgca       660
     cggttctttt ttaactactt accagaaacc aataaagcta aaagcattat tgatttaggc       720
     tgtggtaatg gcgtggtggg tttaatggca ttatcgcgtt gcccaaatgc aaatattact       780
     tttgttgatg agtcgtatat ggccgttgaa tcggcacgct tgaatgtaga gctcaatatg       840
     gaagctaaat atgagcaatg ttcatttgtt gaaaatgact gtttatcggg atttgagcgc       900
     gacagtgttg atatggtgct atgtaacccg ccatttcatc aagctcaagc ggttaccgac       960
     cacattgcat ggcaaatgtt taaagaagca aaagatactt taaaagaagg tggcgaattg      1020
     cgtattattg gcaaccgtca tttagattac cacgacaaac taaaccgtat gtttggtaac      1080
     tgcaagctac taggttctaa caaaaagttt gttgtactta gtgccacaaa aaataccgga      1140
     atgttataa                                                              1149
//
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