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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAI21008; SV 1; linear; genomic DNA; STD; VRT; 867 BP.
XX
PA   AL929003.17
XX
DE   Danio rerio (zebrafish) novel protein similar to vertebrate
DE   pyrroline-5-carboxylate reductase family
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..867
FT                   /organism="Danio rerio"
FT                   /chromosome="20"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="DanioKey"
FT                   /clone="DKEY-235D18"
FT   CDS             complement(join(AL929003.17:83700..83894,
FT                   AL929003.17:85381..85473,AL929003.17:89559..89771,
FT                   AL929003.17:91231..91410,AL929003.17:93185..93249,
FT                   AL929003.17:94982..95060,AL929003.17:95186..95227))
FT                   /locus_tag="DKEY-235D18.3-001"
FT                   /standard_name="OTTDARP00000006622"
FT                   /product="novel protein similar to vertebrate
FT                   pyrroline-5-carboxylate reductase family"
FT                   /note="match: proteins: Tr:Q8FKE0 Tr:Q8R0P9 Tr:Q92EP4
FT                   Tr:Q9DCC4 Tr:Q9H896"
FT                   /db_xref="GOA:Q5SPD7"
FT                   /db_xref="InterPro:IPR000304"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5SPD7"
FT                   /db_xref="ZFIN:ZDB-GENE-041014-244"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAI21008.1"
FT                   /translation="MSLSGASDKTSDSPDVFQIKIGFIGAGNMAFGVAQGIIASGKVPP
FT                   SNIIISAPSMNNLPRFKEKGVSVTHSNHEVVGGSRLIFLAVKPHIIPQVLKEISQEVTK
FT                   EHIIVSMAAGITIATLEELLPAGTHVIRIMPNLPCMLLEGALLLSCGSHAGEQEETLLK
FT                   TLLGPCGLVEFGPESWIDAHVGLSGSGVAFVYVFAEALADGAVKMGMPSTLARRIAAQT
FT                   ILGAGVLLRDSGKLPAELKAEVCTPGGTTIHGIHALEKGGFRAAAIGAVEAASERAREL
FT                   GNKQKKN"
XX
SQ   Sequence 867 BP; 203 A; 213 C; 256 G; 195 T; 0 other; 477305814 CRC32;
     atgagtctgt caggtgcttc agacaagacc agcgattcac ccgatgtgtt tcagattaag        60
     atcggattca tcggagcggg aaacatggcg tttggcgtcg cgcagggaat catcgcctca       120
     gggaaggttc caccaagtaa tataattatt agtgctccat ccatgaacaa ccttcctcgc       180
     tttaaggaga aaggtgtttc agtcactcat tccaatcatg aggttgttgg aggctctcgt       240
     ttgatctttc tggctgtcaa acctcacatc attccacaag tcctaaaaga aatctcacag       300
     gaagtcacca aggaacacat catcgtttcc atggctgccg gaatcactat agcaacactc       360
     gaggagctgt tgcctgctgg aacacatgta atccgtataa tgccgaatct tccctgtatg       420
     ctcctggagg gtgcattact cctgtcctgc ggctcccatg cgggagagca ggaggagacc       480
     ctcctgaaga cgcttcttgg cccctgtggg ttggtggagt ttggacccga gtcctggatc       540
     gacgcccacg tgggcttgag tgggagcggc gtcgcattcg tgtatgtgtt cgcggaggcg       600
     ctggcagatg gtgctgttaa gatggggatg cccagcactc tggctcgacg cattgcagca       660
     cagacaatac tgggtgctgg agtgttactg cgggactccg ggaagctgcc ggcggagctg       720
     aaggccgagg tttgcactcc tggaggaacc accattcacg gcatccacgc gctggagaaa       780
     ggaggattca gagcggctgc gattggcgcg gtggaggcgg cgtcagaaag agctcgagaa       840
     cttggaaaca agcagaagaa gaactga                                           867
//
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