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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAI20715; SV 1; linear; genomic DNA; STD; VRT; 1497 BP.
XX
PA   CR751234.13
XX
DE   Danio rerio (zebrafish) partial novel protein similar to vertebrate
DE   asparagine-linked glycosylation 12 homolog (yeast,
DE   alpha-1,6-mannosyltransferase) (ALG12)
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1497
FT                   /organism="Danio rerio"
FT                   /chromosome="20"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="DanioKey"
FT                   /clone="DKEY-164M14"
FT   CDS             join(CR751234.13:<63569..63721,CR751234.13:67179..67311,
FT                   CR751234.13:67394..67567,CR751234.13:67917..68111,
FT                   CR751234.13:68247..68371,CR751234.13:69303..69526,
FT                   CR751234.13:71739..71908,CR751234.13:71987..72062,
FT                   CR751234.13:72149..72395)
FT                   /codon_start=1
FT                   /locus_tag="DKEY-164M14.3-001"
FT                   /standard_name="OTTDARP00000011061"
FT                   /product="novel protein similar to vertebrate
FT                   asparagine-linked glycosylation 12 homolog (yeast,
FT                   alpha-1,6-mannosyltransferase) (ALG12)"
FT                   /note="match: proteins: Sw:Q8VDB2 Sw:Q9BV10 Tr:Q7QEQ6"
FT                   /db_xref="GOA:Q5RFU6"
FT                   /db_xref="InterPro:IPR005599"
FT                   /db_xref="UniProtKB/TrEMBL:Q5RFU6"
FT                   /db_xref="ZFIN:ZDB-GENE-041210-295"
FT                   /protein_id="CAI20715.1"
FT                   /translation="RKEAVNESCLLIFMISISLLHLFTCPYTKVEESFNLQAIHDILYH
FT                   RFDFEKYDHHEFPGVVPRTFLGPLVISALSAPMTCVLVLFQAPKFYTQILVRGVLGLCV
FT                   ILSLWLMQKEVRRQFGSLVASLFCFICTTQFHLMFYITRTLPNVFALPLVLLAFTSWLA
FT                   QRHGAFIWLSALAAIVFRSELCLFFGLMLLMSLLNRKLNFGQLLYHAIPAGFVSLGLTI
FT                   MFDSLFWNKLLWPEGQVLWYNTVLNKSSNWGISFCKMLTSPFLWYFYSALPRALASTIL
FT                   FIPLGLLDRRTRKLLVVSIGFILLYSLLPHKELRFIIYTFPVFNVIGACGCSFILKNYQ
FT                   KSRIYKIGSIVVVGHLMLNATYTSISLYVSHHNYPGGKAMQELHRLMPTTADVSLHIDV
FT                   LAAQTGVSRFLELNSNWRYDKKEDLTVEDPVMKTYSHLLMEVNATKILLLKDSHKPLVF
FT                   ITGYQSLTFEMFHFPPLKIQLNKKLVLLERQSNKVNGGLN"
XX
SQ   Sequence 1497 BP; 396 A; 326 C; 290 G; 485 T; 0 other; 3782664650 CRC32;
     cgcaaggaag ctgtaaatga gagctgtctc ctaattttca tgatcagtat atcattgcta        60
     catttgttta cttgtcccta caccaaagtt gaagaaagct ttaatttaca agcaattcat       120
     gatattctgt atcacagatt tgattttgaa aagtatgacc atcatgagtt tcctggtgtg       180
     gttccacgca ctttccttgg acccctggtt atatcagcac tgagtgcacc aatgacatgt       240
     gtacttgtgc tctttcaagc accaaaattt tacactcaga tactagtgag aggagttctt       300
     ggactctgtg tgattctgtc actatggctg atgcagaaag aagtccgaag gcagtttggg       360
     tcacttgtgg ccagtctgtt ctgctttatc tgcaccacac agttccatct gatgttttac       420
     attaccagaa ctctcccaaa tgtgtttgct ttgcctttag ttcttctggc attcacctct       480
     tggctggccc agagacatgg cgcattcatt tggctttctg ccttggcagc tattgtgttt       540
     cgttctgaac tgtgtctctt ctttggcctg atgttgctga tgtcactttt gaatagaaaa       600
     ctcaattttg gacagttgct ttaccatgct atacctgctg gttttgtatc gttgggtctc       660
     actatcatgt ttgacagcct tttctggaat aagctgcttt ggcctgaggg tcaggtattg       720
     tggtacaaca cagtcttgaa taaaagctcc aactggggaa tatccttttg taaaatgctt       780
     acttcccctt ttctttggta tttctactcc gctctccctc gagctcttgc cagcacaata       840
     ctttttatcc cacttggcct tttggacaga cggacaagaa agctgctcgt tgtatccata       900
     ggtttcattc tgctgtactc ccttttgccc cataaggaac ttcgttttat catctacacc       960
     ttccctgtat tcaacgtgat tggtgcctgt ggctgttcct tcatattgaa gaattaccaa      1020
     aagtcacgga tatataaaat tggttccata gttgtggttg gacatttgat gttaaatgca      1080
     acatacacaa gcatttctct gtatgtttcc catcacaact acccaggagg aaaagcaatg      1140
     caggaactac atagattaat gccaactaca gcagatgtgt cattacacat cgacgtactt      1200
     gctgcacaaa ctggagtgtc acgctttctg gaactaaata gtaactggag atatgacaag      1260
     aaggaggatt tgacagttga agatccagta atgaaaacct attcacatct attaatggaa      1320
     gtgaatgcaa caaagatatt gctactcaaa gactcgcata agcctttggt cttcattacc      1380
     ggatatcaaa gccttacctt cgagatgttc catttcccac ctctcaaaat tcagctaaac      1440
     aaaaagcttg tgcttttaga aagacaatca aacaaagtaa atggaggatt gaactaa         1497
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