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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH73303; SV 1; linear; genomic DNA; STD; HUM; 2127 BP.
XX
PA   AL138698.15
XX
DE   Homo sapiens (human) dachshund homolog 1 (Drosophila)
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2127
FT                   /organism="Homo sapiens"
FT                   /chromosome="13"
FT                   /map="q21.33-22.3"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11.2"
FT                   /clone="RP11-393H6"
FT   CDS             join(AL139186.16:44499..45352,
FT                   complement(AL138698.15:29874..29989),
FT                   complement(AL163542.8:155572..155733),
FT                   complement(AL163542.8:97856..98028),
FT                   complement(AL163542.8:84836..84971),
FT                   complement(AL163542.8:82040..82174),
FT                   complement(AL163542.8:14013..14164),
FT                   complement(AL163542.8:4185..4332),
FT                   complement(AL163542.8:722..865),
FT                   complement(AL163542.8:157..225),
FT                   complement(AL354995.13:115153..115190))
FT                   /gene="DACH1"
FT                   /locus_tag="RP11-512J14.1-001"
FT                   /standard_name="OTTHUMP00000018493"
FT                   /product="dachshund homolog 1 (Drosophila)"
FT                   /note="match: proteins: Sw:P02814 Sw:Q9QYB2 Sw:Q9UI36
FT                   Tr:P90985 Tr:Q8QHJ0 Tr:Q8QHJ1 Tr:Q8QHJ2 Tr:Q8UUQ4"
FT                   /db_xref="GOA:Q9UI36"
FT                   /db_xref="HGNC:2663"
FT                   /db_xref="InterPro:IPR003380"
FT                   /db_xref="PDB:1L8R"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9UI36"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAH73303.1"
FT                   /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG
FT                   PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS
FT                   NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS
FT                   SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK
FT                   HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC
FT                   TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI
FT                   AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGLELPFMMMPHPLIPVSLPPAS
FT                   VTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHP
FT                   SSHRSSSVSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHE
FT                   SKRMHIEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQ
FT                   GLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKE
FT                   KKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERT
FT                   IQDGRLYLKTTVMY"
XX
SQ   Sequence 2127 BP; 546 A; 614 C; 575 G; 392 T; 0 other; 3140379527 CRC32;
     atggcagtgc cggcggcttt gatccctccg acccagctgg tcccccctca acccccaatc        60
     tccacgtctg cttcctcctc tggcaccacc acctccacct cttcggcgac ttcgtctccg       120
     gctccttcca tcggaccccc ggcgtcctct gggccaactc tgttccgccc ggagcccatc       180
     gcttcggcgg cggcggcggc ggccacagtc acctctaccg gcggcggcgg cggcggcggc       240
     ggcggcggca gcggaggcgg cggcggcagc agcggcaacg gaggcggcgg tggcggcggc       300
     ggcggtggca gcaactgcaa ccccaacctg gcggccgcga gcaacggcag cggcggcggc       360
     ggcggcggca tcagcgctgg cggcggcgtc gcttccagca cccccatcaa cgccagcacc       420
     ggcagcagca gcagcagcag tagcagcagc agcagcagca gcagtagtag cagcagcagc       480
     agtagcagca gcagctgcgg ccccctcccc gggaaacccg tgtactcaac cccgtcccca       540
     gtggaaaaca cccctcagaa taatgagtgc aaaatggtgg atctgagggg ggccaaagtg       600
     gcttccttca cggtggaggg ctgcgagctg atctgcctgc cccaggcttt cgacctgttc       660
     ctgaagcact tggtgggggg cttgcatacg gtctacacca agctgaagcg gctggagatc       720
     acgccggtgg tgtgcaatgt ggaacaagtt cgcatcctga ggggactggg cgccatccag       780
     ccaggagtga accgctgcaa actcatctcc aggaaggact tcgagaccct ctacaatgac       840
     tgcaccaacg caagttctag acctggaagg cctcctaaga ggactcaaag tgtcacctcc       900
     ccagagaact ctcacatcat gccgcattct gtccctggtc tcatgtctcc tgggataatt       960
     ccaccaacag gtctgacagc agccgctgca gcagctgctg ctgctaccaa tgcagctatt      1020
     gctgaagcaa tgaaggtgaa aaaaatcaaa ttagaagcca tgagcaacta tcatgccagt      1080
     aataaccaac atggagcaga ctctgaaaac ggggacatga attcaagtgt cggactggaa      1140
     cttcctttta tgatgatgcc ccaccctcta attcctgtca gcctacctcc agcatctgtc      1200
     accatggcaa tgagccagat gaaccacctc agcaccattg caaatatggc agcagcagca      1260
     caagttcaga gtcccccatc cagagttgag acatcagtta ttaaggagcg tgttcctgat      1320
     agcccctcac ctgccccctc tctggaggag gggagaaggc ctggcagtca cccatcatca      1380
     catcgcagca gcagcgtgtc cagctcccct gctcggactg agagctcttc tgacagaatc      1440
     ccggtccatc agaatgggtt gtccatgaac cagatgctga tgggcttatc accaaatgta      1500
     cttcctgggc ccaaagaggg agatttggcc ggtcatgaca tgggacatga gtcaaaaagg      1560
     atgcatattg aaaaagatga gaccccgctt tctacaccaa ccgcaagaga cagccttgac      1620
     aaactctctc taactgggca tggacaacca ctgcctccag gttttccatc tccttttctg      1680
     tttcctgatg gactgtcttc catcgagact cttctgacta acatacaggg gctgttgaaa      1740
     gttgccatag ataatgccag agctcaagag aaacaggtcc aactggaaaa aactgagctg      1800
     aagatggatt ttttaaggga aagagaacta agggaaacac ttgagaagca gttggctatg      1860
     gaacaaaaga atagagccat agttcaaaag aggctaaaga aggagaagaa ggcaaagaga      1920
     aaattgcagg aagcacttga gtttgagacg aaacggcgtg aacaagcaga acagacgcta      1980
     aaacaggcag cttcaacaga tagtctcagg gtcttaaatg actctctgac cccagagata      2040
     gaggctgacc gcagtggcgg cagaacagat gctgaaagga caatacaaga tggaagactg      2100
     tatttgaaaa ctactgtcat gtactga                                          2127
//
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