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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH68966; SV 1; linear; genomic DNA; STD; VRT; 1175 BP.
XX
PA   BX276180.5
XX
DE   Danio rerio (zebrafish) partial novel protein similar to vertebrate
DE   allantoicase (ALLC)
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1175
FT                   /organism="Danio rerio"
FT                   /chromosome="20"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-211"
FT                   /clone="CH211-284K10"
FT   CDS             join(BX276180.5:22732..22821,BX276180.5:23960..24010,
FT                   BX276180.5:24084..24171,BX276180.5:24505..24624,
FT                   BX276180.5:26341..26420,BX276180.5:26518..26650,
FT                   BX276180.5:31662..31817,BX276180.5:32160..32233,
FT                   BX276180.5:32308..32416,BX276180.5:37239..37366,
FT                   BX276180.5:37462..>37607)
FT                   /locus_tag="CH211-284K10.3-001"
FT                   /standard_name="OTTDARP00000005531"
FT                   /product="novel protein similar to vertebrate allantoicase
FT                   (ALLC)"
FT                   /note="match: proteins: Sw:Q640T1 Sw:Q8N6M5 Sw:Q8N6M5
FT                   Sw:Q8N6M5 Sw:Q9JHX6 Sw:Q9W6S5 Tr:Q7Z086 Tr:Q8JHV1
FT                   Tr:Q9W6S5"
FT                   /db_xref="GOA:Q6DGA6"
FT                   /db_xref="InterPro:IPR015908"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6DGA6"
FT                   /db_xref="ZFIN:ZDB-GENE-040718-471"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAH68966.1"
FT                   /translation="MAKRQVQKETRSQPHFLQFNNLACETAGGKVIFATDEWFAPARNL
FT                   LKRDPPEFIASAFTEFGKWMDGWETRRKRIPGHDWCIVQLGVPGIIHGFDVDTSFFTGN
FT                   YAPFASIQATCLDQMPSIALEGDRTGMAASPSQFEAVAQLNSDSWKEVVPVTKLKAGYS
FT                   DTCHNYLSVSYPHRVTHIRFNIYPDGGIARLKVYGIGKKDWSSVFGQDLVDLVALVNGG
FT                   VCVGFSDAHYGHPRNMIGLGMAENMGDGWETARRLDRPRVLKEDENGILQVPGSEWAIF
FT                   RLGHPGIISKIELDTNHFKGNFPDSCRIEACSLTEDEENSFIQSQWSSDRSPMWNILLP
FT                   PQKMKAHHRHVFSGPSLVHCGPVSHVRMVIAPDGGISRLRIWGRPVSSHQM"
XX
SQ   Sequence 1175 BP; 310 A; 257 C; 321 G; 287 T; 0 other; 161969595 CRC32;
     atggcaaaac gacaggtgca gaaggagacc aggagtcaac cacatttctt acagttcaac        60
     aacctcgcgt gcgaaacagc tggaggaaag gtgatatttg ccacagatga atggtttgcc       120
     cctgctagaa atcttttgaa gagagatcct cctgaattca tagcctctgc atttactgaa       180
     ttcgggaaat ggatggatgg ctgggaaacc aggagaaaaa gaattccagg tcatgactgg       240
     tgcattgtgc agttaggagt tccaggaata attcatggat ttgatgtgga cacatccttc       300
     tttacaggga actatgcccc atttgcctcc attcaagcca cgtgtcttga tcagatgcca       360
     tcgatcgctc ttgaaggaga tcgtaccggc atggcagctt caccaagcca gtttgaagct       420
     gtggctcagc ttaactcaga cagctggaag gaagttgtcc cggtgacaaa gctgaaggcg       480
     gggtactctg acacatgcca caactacctg agtgtctcct acccacacag agtaacccat       540
     atccgcttca acatatatcc agatggtggc attgcaagac taaaggttta tggcattggg       600
     aagaaggact ggtccagtgt gtttggtcaa gacttggtgg atctcgtagc cttggtcaat       660
     ggtggcgtat gtgttggctt cagcgatgcc cactatgggc acccacgcaa tatgattggt       720
     ctgggaatgg ctgaaaacat gggtgatggg tgggagacgg ccagacgtct tgatcggccc       780
     agagttttaa aggaggatga gaacggcata ttgcaagtgc cagggagtga gtgggccatt       840
     ttcagattag gccatcctgg cattataagt aaaattgagc tggacaccaa ccattttaaa       900
     ggcaatttcc cagactcctg caggattgag gcttgtagtt tgacagagga tgaggaaaac       960
     agcttcattc agagtcagtg gagctcagac aggagcccca tgtggaatat tctacttcct      1020
     cctcaaaaaa tgaaggccca ccacaggcat gtgttttctg ggccatcact ggtgcattgt      1080
     gggcctgtgt ctcatgtgcg gatggtcatt gctcctgatg gaggcatcag cagactcaga      1140
     atctggggcc gaccggtgtc cagtcatcag atgat                                 1175
//
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