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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH38826; SV 1; linear; genomic DNA; STD; PRO; 1698 BP.
XX
PA   BX571966.1
XX
DE   Burkholderia pseudomallei K96243 putative choline dehydrogenase
XX
OS   Burkholderia pseudomallei K96243
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; pseudomallei group.
OX   NCBI_TaxID=272560;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1698
FT                   /organism="Burkholderia pseudomallei K96243"
FT                   /chromosome="2"
FT                   /strain="K96243"
FT                   /mol_type="genomic DNA"
FT   CDS             BX571966.1:1850596..1852293
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="BPSS1355"
FT                   /product="putative choline dehydrogenase"
FT                   /EC_number="1.1.99.1"
FT                   /note="Similar to Escherichia coli choline dehydrogenase
FT                   BetA or b0311 SWALL:BETA_ECOLI (SWALL:P17444) (556 aa)
FT                   fasta scores: E(): 1.2e-184, 77.47% id in 555 aa, and to
FT                   Pseudomonas aeruginosa choline dehydrogenase BetA or pa5372
FT                   SWALL:Q9HTJ2 (EMBL:AE004949) (561 aa) fasta scores: E():
FT                   3.4e-190, 79.85% id in 561 aa, and to Yersinia pestis
FT                   choline dehydrogenase BetA or ypo1165 SWALL:Q8ZGW0
FT                   (EMBL:AJ414146) (567 aa) fasta scores: E(): 1.4e-185,
FT                   77.95% id in 558 aa"
FT                   /db_xref="GOA:Q63KK7"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q63KK7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH38826.1"
FT                   /translation="MTTREFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFD
FT                   FRTQMPAALAYPLQGRRYNWAYETDPEPHMNHRRMECGRGKGLGGSSLINGMCYIRGNA
FT                   LDYDNWATHKALEDWAYLDCLPYFRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEA
FT                   MVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTH
FT                   ALADRILFSGKRATGVTFLHGSARVTAHARREVLVCSGAIASPQLLQRSGVGPGEWLRE
FT                   LDIPVVLDLPGVGRNLQDHLEMYIQFECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGA
FT                   SNHFEAGGFIRTRDDDPWPNIQYHFLPVAINYNGSNAIEMHGFQAHVGSMRSPSRGRVK
FT                   LKSRDPHAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRFRGRELNPGADLKSD
FT                   NELDTFVRARAETAFHPSCSCKMGYDDMAVVDNEGRVHGIDGLRVVDASIMPIITTGNL
FT                   NAPTIMIAEKIADRIRQHKPLERSNAQYYVANGAPARGGKPARAPAVV"
XX
SQ   Sequence 1698 BP; 308 A; 594 C; 552 G; 244 T; 0 other; 3707305828 CRC32;
     atgacgacac gcgaattcga ctacatcatc tgcggcgccg gctccgcggg caacgtgctc        60
     gcgacgcgcc tcaccgagga tccgggcgtc accgtgctgc tcctcgaggc gggcggcccc       120
     gactaccgtt tcgacttccg cacgcagatg ccggcggcgc tcgcctaccc gctgcaaggc       180
     cgccgctaca actgggcgta cgaaaccgat cccgagccgc acatgaacca ccgccggatg       240
     gaatgcgggc gcggcaaggg gctcggcggc tcgtcgctga tcaatgggat gtgctacatc       300
     cgcggcaatg cgctcgatta cgacaactgg gcgacgcaca aggcgctcga ggactgggcg       360
     tatctcgatt gcctgccgta cttcaggaag gccgagacgc gcgacgtcgg cccgaacgac       420
     tatcacggcg gtgacggccc ggtctccgtg acgacgagca agcccggcgt gaatccgctg       480
     ttcgaggcga tggtcgaggc cggcgtgcag gccggctatc cgcgcaccga cgatctcaac       540
     ggctatcagc aggaaggctt cggcccgatg gaccgcacgg tcacgccgcg cggccgccgc       600
     gcctcgaccg cgcgcggcta tctcgaccag gcgcgcgcgc ggccgaatct cgaaatcgtc       660
     acgcacgcgc ttgccgatcg catcctgttc tccggcaagc gcgcaacggg cgtcacgttc       720
     ctgcacggca gcgcgcgcgt caccgcgcac gcgcgccgcg aagtgctcgt gtgcagcggc       780
     gcgatcgcat cgccgcaact gctgcagcgc tcgggcgtcg gccccggcga atggctgcgc       840
     gagctcgaca ttccggtcgt gctcgacctg cccggcgtcg gccgcaatct gcaggatcac       900
     ctggagatgt acatccagtt cgaatgcaag gagccggtat cgctatatcc ggcgctcaag       960
     tggtggaacc agccgaagat cggcctcgaa tggatgctca acggcaccgg gctcggcgcg      1020
     agcaaccact tcgaggcggg cggcttcatt cgcacccgcg acgacgatcc gtggccgaac      1080
     atccaatatc acttcctgcc cgtcgcgatc aattacaacg gctcgaacgc gatcgagatg      1140
     cacggcttcc aggcgcacgt cggctcgatg cgctcgccga gccgcgggcg cgtgaagctg      1200
     aagtcgcgcg acccgcacgc gcatccgagc atcctgttca attacatggc cgaggcgctc      1260
     gactggcgcg agttccgcga cgcgatccgc gcgacgcgcg agatcatgcg gcagcccgcg      1320
     ctcgaccgct tccgcggccg cgagctgaac ccgggcgcgg atctgaaaag cgacaacgag      1380
     ctcgatacgt tcgtacgcgc gcgcgcggaa acggcattcc atccgtcatg ctcgtgcaag      1440
     atgggctacg acgacatggc ggtggtcgac aacgaaggcc gcgtgcacgg gatcgacgga      1500
     ttgcgggtcg tcgacgcgtc gatcatgccg atcatcacga ccggcaatct gaacgcaccg      1560
     acgatcatga tcgccgagaa gatcgccgac cggatccgcc agcacaagcc gctcgaacgc      1620
     tcgaacgcgc aatactacgt cgcgaacggc gcgcccgcgc gcggcggcaa gcccgcgcgg      1680
     gcgcccgccg tcgtatag                                                    1698
//
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