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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH34986; SV 1; linear; genomic DNA; STD; PRO; 387 BP.
XX
PA   BX571965.1
XX
DE   Burkholderia pseudomallei K96243 putative aspartate 1-decarboxylase
XX
OS   Burkholderia pseudomallei K96243
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; pseudomallei group.
OX   NCBI_TaxID=272560;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..387
FT                   /organism="Burkholderia pseudomallei K96243"
FT                   /chromosome="1"
FT                   /strain="K96243"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX571965.1:1148137..1148523)
FT                   /transl_table=11
FT                   /gene="panD"
FT                   /locus_tag="BPSL0990"
FT                   /product="putative aspartate 1-decarboxylase"
FT                   /note="Similar to Escherichia coli, and Escherichia coli
FT                   O157:H7 aspartate 1-decarboxylase precursor PanD or b0131
FT                   or z0142 or ecs0135 SWALL:PAND_ECOLI (SWALL:P31664) (126
FT                   aa) fasta scores: E(): 9e-26, 55.2% id in 125 aa, and to
FT                   Ralstonia solanacearum aspartate 1-decarboxylase precursor
FT                   PanD or rsc2731 or rs00123 SWALL:Q8XVU6 (EMBL:AL646071)
FT                   (120 aa) fasta scores: E(): 4.8e-25, 60.34% id in 116 aa,
FT                   and to Alcaligenes eutrophus aspartate 1-decarboxylase
FT                   precursor PanD SWALL:PAND_ALCEU (SWALL:Q9ZHI5) (120 aa)
FT                   fasta scores: E(): 1.1e-24, 60.34% id in 116 aa"
FT                   /db_xref="GOA:Q63W98"
FT                   /db_xref="InterPro:IPR003190"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q63W98"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH34986.1"
FT                   /translation="MQRHMLKSKIHRAAVTHCELHYEGSCAIDEDLLEAANIVENERID
FT                   IWNVNNGERFSTYAIKGERGSGMISLNGSAARRAQLGDLVIIAAFAMIDEQELKAGWKP
FT                   DLVFVDEDNKIKGSRDHVPTQNWT"
XX
SQ   Sequence 387 BP; 91 A; 111 C; 128 G; 57 T; 0 other; 1693007367 CRC32;
     atgcagcgcc acatgctgaa atcgaagatc caccgcgcgg cggtcacgca ctgcgagctg        60
     cattacgaag gctcgtgcgc gatcgacgag gacttgctcg aagcggcgaa catcgtcgag       120
     aacgagcgga tcgacatctg gaacgtcaac aacggcgagc gcttttcgac gtacgcgatc       180
     aagggcgagc gcggcagcgg gatgatttcg ctgaacggct cggccgcgcg ccgcgcgcaa       240
     ctgggcgacc tcgtgatcat cgccgcgttc gcgatgatcg acgagcaaga attgaaggcg       300
     ggctggaagc cggatctcgt gttcgtcgac gaagacaaca agatcaaggg cagccgcgat       360
     cacgtgccga cgcagaactg gacgtaa                                           387
//
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