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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH09224; SV 1; linear; genomic DNA; STD; PRO; 873 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative isoprene biosynthesis related
DE   reductase protein
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..873
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             CR626927.1:4159805..4160677
FT                   /transl_table=11
FT                   /locus_tag="BF3536"
FT                   /product="putative isoprene biosynthesis related reductase
FT                   protein"
FT                   /note="Similar to Thermoanaerobacter tengcongensis
FT                   4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH or
FT                   LytB or TTE1352 SWALL:ISPH_THETN (SWALL:Q8RA76) (288 aa)
FT                   fasta scores: E(): 5.7e-28, 36.8% id in 288 aa, and to
FT                   Escherichia coli, Escherichia coli O6, and Escherichia coli
FT                   O157:H7 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
FT                   IspH or LytB or B0029 or C0033 or Z0034 or ECS0032
FT                   SWALL:ISPH_ECOLI (SWALL:P22565) (316 aa) fasta scores: E():
FT                   7.7e-18, 28.07% id in 285 aa"
FT                   /db_xref="GOA:Q5L9K3"
FT                   /db_xref="InterPro:IPR003451"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5L9K3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH09224.1"
FT                   /translation="MVKVEIDEGSGFCFGVVTAIHKAEEELAKGVTLYCLGDIVHNSRE
FT                   VERLKEMGLITINHEEFKQLHNAKVLLRAHGEPPETYIIAKENNIEIIDATCPVVLRLQ
FT                   KRIKQEYMQEDLDEKQIVIYGKNGHAEVLGLVGQTTGKAIVIEKLDEARRLDFSKSIRL
FT                   YSQTTKSLDEFWEIVEYIKEHISPDVTFEYYDTICRQVANRMPNLRKFAASHDLIFFVS
FT                   GKKSSNGKMLFEECKKVNPNSHLIDSADEIDDSLLPGVNSIGVCGATSTPKWLMEEISE
FT                   AIKAQIKRQ"
XX
SQ   Sequence 873 BP; 289 A; 190 C; 200 G; 194 T; 0 other; 2142797668 CRC32;
     atggtaaaag tagaaataga tgaaggttcc ggtttttgct ttggagtggt cacagctatc        60
     cacaaagccg aagaggaact cgcaaaaggg gtaacactct attgcctggg agacattgta       120
     cacaacagcc gtgaagtgga acgcctgaaa gagatggggc tgattaccat caatcatgaa       180
     gagttcaaac aactccataa cgccaaagtg cttttgcgtg cccatggcga accacccgaa       240
     acctatatca ttgccaaaga aaataatatt gaaatcatcg atgccacgtg tccggtggta       300
     ctccgcctgc aaaaacgaat caaacaagag tatatgcagg aggacctcga cgaaaaacaa       360
     atcgtaattt acggaaagaa cggacatgcg gaagtcttag gtttggtagg gcagacaacc       420
     ggcaaagcta ttgtgataga aaagctcgac gaggctcgcc ggctggattt cagcaaaagc       480
     atacgcctgt actcgcagac aaccaaatca ctggatgaat tctgggaaat tgtggaatat       540
     atcaaggagc acatctctcc cgacgtaact tttgagtact acgataccat ttgccgccaa       600
     gtggccaacc gtatgcccaa cctacgaaag tttgccgcat cacacgattt gatcttcttc       660
     gtcagtggta aaaaaagttc aaatggcaaa atgttattcg aagaatgcaa aaaagtcaac       720
     ccgaattcac atttgataga cagtgccgac gaaattgacg actctttact acccggtgtc       780
     aattctatcg gtgtatgcgg ggctacatcg actcctaaat ggctgatgga agaaatctct       840
     gaagctataa aggcacagat taaaagacaa tga                                    873
//
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