spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH09181; SV 1; linear; genomic DNA; STD; PRO; 1167 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative terpenoid biosynthesis related
DE   reductoisomerase
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1167
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR626927.1:4114904..4116070)
FT                   /transl_table=11
FT                   /locus_tag="BF3492"
FT                   /product="putative terpenoid biosynthesis related
FT                   reductoisomerase"
FT                   /note="Similar to Porphyromonas gingivalis W83
FT                   1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr or
FT                   PG1364 SWALL:AAQ66428 (EMBL:AE017176) (385 aa) fasta
FT                   scores: E(): 7.6e-84, 60.05% id in 383 aa, and to Bacillus
FT                   subtilis 1-deoxy-D-xylulose 5-phosphate reductoisomerase
FT                   Dxr or BSU16550 SWALL:DXR_BACSU (SWALL:O31753) (388 aa)
FT                   fasta scores: E(): 9.7e-61, 46.99% id in 366 aa"
FT                   /db_xref="GOA:Q5L9P6"
FT                   /db_xref="InterPro:IPR013512"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5L9P6"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH09181.1"
FT                   /translation="MNEIKKKQIAILGSTGSIGTQALQVIEEHPELYEVYALTANNKVD
FT                   LLIAQARKFMPEAVVIANEEKYAQLKEALSDLPVKVYAGAAALCQIVESGPIDVVLTAM
FT                   VGYAGLKPTMNAIRAGKAIALANKETLVVAGELINQLARQYRTPILPVDSEHSAVFQCL
FT                   AGEVGNPIEKVILTASGGPFRTCTMEQLKTVTKVQALKHPNWEMGAKITIDSASMMNKG
FT                   FEVIEAKWLFGVQPSQIEVVVHPQSVIHSMVQFEDGAIKAQLGMPDMRLPIQYAFSYPD
FT                   RINSSFDRLDFSKCTNLTFEQPDTKRFRNLALAYESMYRGGNMPCIVNAANEVVVAAFL
FT                   RDEISFLGMSDVIEHTMGQVSFVQTPTYDDYVATDAEARRIARELICK"
XX
SQ   Sequence 1167 BP; 301 A; 251 C; 310 G; 305 T; 0 other; 4182923498 CRC32;
     atgaacgaga taaagaagaa acaaatagct atcttaggct ctacgggttc tattggtacc        60
     caggccttgc aggttatcga agagcatccc gaactgtacg aggtgtatgc actgactgcc       120
     aataataagg tagatctcct gatagcccag gcacgtaagt ttatgcctga ggctgtagtt       180
     atagccaatg aagagaaata tgcccaactg aaagaggctc tcagcgacct gcctgttaag       240
     gtgtatgcag gtgctgctgc gttatgccag attgtagagt ccggccctat cgatgtagtt       300
     ctgaccgcta tggtggggta tgcgggattg aagccgacca tgaatgccat tcgtgccgga       360
     aaagccattg cccttgccaa taaagagaca ctggtagttg ccggagagtt gattaatcag       420
     ttagcccggc aataccgtac accgattctt cctgtcgatt ccgaacattc ggcagtattt       480
     cagtgtttgg ccggagaggt aggcaatccg atagagaaag ttatcctgac tgcttccgga       540
     ggtcctttcc gtacatgtac tatggaacag ttgaagactg tgacaaaagt acaggctctc       600
     aaacatccga attgggaaat gggagctaag atcactattg actctgcctc gatgatgaac       660
     aaggggttcg aagtgatcga agccaaatgg ttgtttggcg tacagcccag ccagattgag       720
     gtggtggtac atccgcagtc ggttattcat tcgatggtgc agtttgagga tggagcaata       780
     aaggcccagt tgggaatgcc cgatatgcgt ctgcccattc agtatgcttt ctcttatccc       840
     gatcgtatca attcgtcttt cgaccggctt gatttttcga aatgtacgaa ccttactttt       900
     gagcaacccg ataccaagcg gttccgtaat ctggcattgg cctatgaatc gatgtatagg       960
     ggagggaata tgccttgcat cgtaaatgcg gccaacgagg tggttgtggc ggcttttctt      1020
     cgtgatgaaa tcagctttct cggcatgagt gatgtgatag aacataccat ggggcaggtg      1080
     tctttcgtac agactcctac ttacgacgac tatgtggcaa ccgatgcgga agcacgccgg      1140
     attgcccgtg aattaatatg taaataa                                          1167
//
spacer
spacer