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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH09151; SV 1; linear; genomic DNA; STD; PRO; 996 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative LPS biosynthesis related
DE   glycosyltransferase
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..996
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR626927.1:4084592..4085587)
FT                   /transl_table=11
FT                   /locus_tag="BF3460"
FT                   /product="putative LPS biosynthesis related
FT                   glycosyltransferase"
FT                   /note="Similar to Helicobacter pylori
FT                   alpha1,3-fucosyltransferase FucT SWALL:O30511
FT                   (EMBL:AF008596) (478 aa) fasta scores: E(): 4.1e-20, 36.02%
FT                   id in 322 aa, and to Helicobacter pylori fucosyltransferase
FT                   HP0651 SWALL:O25366 (EMBL:AE000578) (476 aa) fasta scores:
FT                   E(): 5.4e-20, 36.77% id in 310 aa"
FT                   /db_xref="GOA:Q5L9S6"
FT                   /db_xref="InterPro:IPR001503"
FT                   /db_xref="UniProtKB/TrEMBL:Q5L9S6"
FT                   /protein_id="CAH09151.1"
FT                   /translation="MCDCLSIILLVKMKKIYLKFVDFWDGFDTISNFIVDALSIQYEVV
FT                   LSNEPDYLFYSCFGTSHLEYDCIKIMFIGENIVPDFNVCDYAIGFNYIDFGDRYLRLPL
FT                   YAIYDGFSNLQNKKIDVNKALDRKFCSIVVSNNKWADPIRETFFKLLSSYKKVDSGGRA
FT                   WNNIGGPVDNKLDFISQYKFNIAFENSRVLGYTTEKIMEPMQVNSIPVYWGNPLVGKDF
FT                   NVDSFVNAHDFDSLERLVEYIIELDSSKDKYLEMLEKPWLLDKTYLDWKQLLLNFINNI
FT                   MMKSYKDAKYLVNYGHAGKYRNEQRFWGRCERKFKLQRIIEYYSQLFDRK"
XX
SQ   Sequence 996 BP; 331 A; 96 C; 193 G; 376 T; 0 other; 3984223121 CRC32;
     ttgtgtgatt gcttgtctat catattgtta gtcaaaatga aaaagattta tttgaaattt        60
     gttgattttt gggatggatt tgatactatt tctaacttta ttgtggatgc tttgtccatt       120
     caatacgaag tagtactatc taatgagcca gattatttat tctattcatg ttttggaacg       180
     tcacatttag aatatgattg tataaaaatc atgtttatag gtgaaaatat agttcctgat       240
     tttaacgttt gtgattatgc cataggtttt aattatattg attttgggga ccgttacttg       300
     aggttgcctt tatatgctat atatgatgga ttttcaaact tgcagaataa aaagattgat       360
     gtaaataaag ctttagaccg taaattttgt agtattgttg tttcaaataa taaatgggca       420
     gatcctattc gtgagacttt ctttaaatta ctatctagtt ataagaaagt agactctggt       480
     ggaagagctt ggaataatat aggaggacct gttgataata aattggattt tattagccaa       540
     tataagttta atattgcttt tgaaaatagt agggtactgg gatatacaac agaaaaaata       600
     atggaaccta tgcaggtgaa ttctattcca gtatattggg gaaatccttt ggttggtaaa       660
     gattttaatg tggactcctt tgtaaatgct catgattttg attctttaga aagattagtt       720
     gagtatatta tagaattgga ttcttcaaag gataaatatc tggaaatgtt ggaaaaacct       780
     tggcttctcg ataagacata tttggattgg aaacaattgc tgttaaattt tattaataat       840
     attatgatga aatcatataa ggatgcgaag tatttggtta attatggtca tgctggaaag       900
     tatagaaatg aacaacgctt ttgggggaga tgtgaacgta aatttaaact tcaaagaatt       960
     attgaatatt attctcaatt gtttgataga aaataa                                 996
//
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