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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH07098; SV 1; linear; genomic DNA; STD; PRO; 708 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative pyridoxamine 5'-phosphate oxidase
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..708
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR626927.1:1652013..1652720)
FT                   /transl_table=11
FT                   /gene="pdxH"
FT                   /locus_tag="BF1385"
FT                   /product="putative pyridoxamine 5'-phosphate oxidase"
FT                   /EC_number="1.4.3.5"
FT                   /note="Similar to Escherichia coli, and Shigella flexneri
FT                   pyridoxamine 5'-phosphate oxidase PdxH or B1638 or SF1663
FT                   or s1795 SWALL:PDXH_ECOLI (SWALL:P28225) (217 aa) fasta
FT                   scores: E(): 1.4e-35, 46.72% id in 214 aa, and to
FT                   Bacteroides thetaiotaomicron pyridoxamine 5'-phosphate
FT                   oxidase BT1577 SWALL:AAO76684 (EMBL:AE016932) (213 aa)
FT                   fasta scores: E(): 1e-68, 77.72% id in 211 aa, and to
FT                   Synechocystis sp. pyridoxamine 5'-phosphate oxidase PdxH or
FT                   sll1440 SWALL:PDXH_SYNY3 (SWALL:P74211) (230 aa) fasta
FT                   scores: E(): 1.6e-40, 46.66% id in 225 aa"
FT                   /db_xref="GOA:Q5LFJ5"
FT                   /db_xref="InterPro:IPR012349"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5LFJ5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH07098.1"
FT                   /translation="MSTDHVSTHPDSPLHGNGIGSEAINLAAIRQEYTKGGLKEGDLPD
FT                   NPLSLFNRWLHEAIDAQVDEPTAMLVGTVSPEGQPSTRTVLLKDLHDGKFIFYTNYESR
FT                   KGTHLAKNPYISLSFVWHALERQVHIEGIASKVPAGESDTYFRQRPYKSRIGARISPQS
FT                   RPLKSRMQLIRNFVAEAARWVGREVERPAHWGGYAVTPHRIEFWQGRANRLHDRFLYSL
FT                   QPDGSWQKERLAP"
XX
SQ   Sequence 708 BP; 182 A; 200 C; 175 G; 151 T; 0 other; 2482806294 CRC32;
     atgtcaaccg atcatgtatc cacacatccc gactcccctc ttcacggaaa cgggatcggg        60
     agtgaggcta tcaacctcgc tgccatccgg caggagtaca ccaaaggcgg gctgaaggaa       120
     ggagatcttc ccgacaaccc gctttctctt ttcaaccgat ggctccacga agctatcgat       180
     gcacaggtag acgaacctac tgccatgctg gtaggcaccg tatctcccga agggcaacca       240
     tcgacccgta ccgtactgct aaaggatttg catgatggaa agtttatctt ttataccaat       300
     tacgaaagcc ggaaaggtac ccatctggca aagaatccgt atatttccct ctctttcgtt       360
     tggcacgcgc tggaaaggca ggtacacatt gaaggcattg cctcaaaagt tcctgccgga       420
     gagtctgata cctatttccg ccaacgtccc tacaaaagcc gtataggagc acgcatctct       480
     cctcaaagcc gtccgttgaa aagccggatg caactgattc gcaatttcgt tgcagaagca       540
     gcccgatggg taggcagaga agtagagcgc cccgcacact ggggaggata tgccgtcact       600
     ccgcatcgga tcgagttctg gcaaggtagg gcaaaccggc ttcacgatcg ctttctatat       660
     tcccttcaac cggacggaag ctggcagaaa gagaggcttg ctccctga                    708
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