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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH06920; SV 1; linear; genomic DNA; STD; PRO; 1002 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative xylosidase/arabinosidase
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1002
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             CR626927.1:1459939..1460940
FT                   /transl_table=11
FT                   /locus_tag="BF1198"
FT                   /product="putative xylosidase/arabinosidase"
FT                   /note="Similar to Bacteroides ovatus
FT                   xylosidase/arabinosidase xsa SWALL:XYLB_BACOV
FT                   (SWALL:P49943) (325 aa) fasta scores: E(): 8.9e-09, 29.3%
FT                   id in 331 aa, and to Bacteroides thetaiotaomicron arabinan
FT                   endo-1,5-alpha-L-arabinosidase A precursor BT3516
FT                   SWALL:AAO78622 (EMBL:AE016941) (637 aa) fasta scores: E():
FT                   7.5e-93, 63.63% id in 330 aa, and to Bacteroides
FT                   thetaiotaomicron endo-1,4-beta-xylanase D precursor BT3675
FT                   SWALL:AAO78780 (EMBL:AE016941) (333 aa) fasta scores: E():
FT                   2.2e-29, 38.37% id in 344 aa"
FT                   /db_xref="GOA:Q5LG21"
FT                   /db_xref="InterPro:IPR006710"
FT                   /db_xref="UniProtKB/TrEMBL:Q5LG21"
FT                   /protein_id="CAH06920.1"
FT                   /translation="MKHLVICIALLTVGACCFAQQKKVASHKAASGNPVFQGWYADPEG
FT                   IIYDDTYWIFPTWSDLYENQTFFDCFSSKDLVNWTKHASVLDTTAVKWAKKAMWAPSVI
FT                   RKNGKYYIFFGANDVHEGEIGGIGVAVSDRPEGPYKDLLGKPLINEIVNGAQPIDQFVY
FT                   NDNGHYYMYYGGWGHCNVVQLNDDFTGLVPFEDGTVYKEVTPENYVEGPFMFKKDGKYY
FT                   FMWSEGGWGGPDYSVAYAISDSPFGPFKRVAKILQQDPSVATSAGHHSLLHAPGTDDYY
FT                   IVYHRRPLNDNARDHRVTCIDKMTFDKDGFINPVKMTFEGVPAQKIKKSKKK"
XX
SQ   Sequence 1002 BP; 283 A; 164 C; 243 G; 312 T; 0 other; 1144703329 CRC32;
     atgaaacact tagttatttg catcgctctg ttgacagtcg gtgcttgctg ctttgctcag        60
     caaaagaaag tggcttctca taaagccgca agtgggaacc ctgtatttca aggatggtat       120
     gctgatccgg aaggtatcat ttatgatgat acttattgga tttttccaac ttggagtgat       180
     ctttacgaaa atcagacttt tttcgattgt ttctcttcca aagatcttgt gaattggacg       240
     aaacatgctt cagttttgga cactactgcc gtaaaatggg ctaagaaagc gatgtgggct       300
     ccttcggtaa tcagaaagaa tgggaaatat tatatcttct ttggagcgaa tgacgttcat       360
     gaaggagaga ttggcggtat tggcgtagcg gttagcgatc gtcctgaagg accttataaa       420
     gatttattgg gtaagccgtt gattaatgaa atagtgaatg gagcgcaacc gatcgatcag       480
     tttgtataca atgataatgg acattattat atgtattatg gtggttgggg gcattgcaat       540
     gttgtacagt tgaacgatga ttttacaggg ctcgttcctt ttgaagatgg cactgtctat       600
     aaagaagtga ctccggagaa ctatgttgaa ggtccgttta tgttcaagaa agacggtaaa       660
     tattatttta tgtggagtga aggtggttgg ggaggtcccg attactctgt agcttatgct       720
     atttccgatt ctccgttcgg accttttaaa cgggtagcta agattctgca acaagatcct       780
     tcggtagcta ccagtgccgg tcatcattca ttactgcatg ctcccggaac agatgattat       840
     tatatagtct atcatcgtcg tccactgaat gataatgcac gcgatcatcg tgtgacatgc       900
     attgataaaa tgacgtttga taaggatgga tttattaatc ctgtaaagat gactttcgaa       960
     ggagtgcctg cacaaaagat taagaagtct aaaaagaaat ag                         1002
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