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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH06885; SV 1; linear; genomic DNA; STD; PRO; 564 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative peptidyl-tRNA hydrolase
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OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..564
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR626927.1:1421220..1421783)
FT                   /transl_table=11
FT                   /gene="pth"
FT                   /locus_tag="BF1163"
FT                   /product="putative peptidyl-tRNA hydrolase"
FT                   /EC_number="3.1.1.29"
FT                   /note="Similar to Escherichia coli, Escherichia coli O6,
FT                   and Escherichia coli O157:H7 peptidyl-tRNA hydrolase Pth or
FT                   B1204 or C1662 or Z1975 or ECS1709 SWALL:PTH_ECOLI
FT                   (SWALL:P23932) (194 aa) fasta scores: E(): 2.2e-16, 37.63%
FT                   id in 186 aa, and to Bacteroides thetaiotaomicron
FT                   peptidyl-tRNA hydrolase BT4588 SWALL:Q89YZ2 (EMBL:AE016945)
FT                   (189 aa) fasta scores: E(): 8.3e-67, 88.83% id in 188 aa,
FT                   and to Thermoanaerobacter tengcongensis peptidyl-tRNA
FT                   hydrolase Pth or TTE2567 SWALL:PTH_THETN (SWALL:Q8R757)
FT                   (185 aa) fasta scores: E(): 1e-25, 43.85% id in 187 aa"
FT                   /db_xref="GOA:Q5LG56"
FT                   /db_xref="InterPro:IPR018171"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5LG56"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH06885.1"
FT                   /translation="MKYLIVGLGNIGPEYHETRHNIGFMVLDALARANNLSFTDGRYGF
FT                   TTTLSVKGRQMILLKPSTFMNLSGNAVRYWMQKENIPLENVLIIVDDLALPFGTLRLKS
FT                   KGSDAGHNGLKHIATILGTQNYARLRFGIGNDFPRGGQIDFVLGHFTDEDWKTMDERLE
FT                   TAGEIAKSFCLAGIDITMNQFNKK"
XX
SQ   Sequence 564 BP; 187 A; 113 C; 119 G; 145 T; 0 other; 2900278221 CRC32;
     atgaaatact taattgtcgg gttaggcaat attggtccgg aatatcatga aacccgccat        60
     aatataggtt ttatggtatt ggatgcttta gccagagcaa acaacctatc attcacagat       120
     ggtcgttatg gctttaccac taccctatct gtcaaaggaa gacaaatgat cttgttaaaa       180
     ccctcgacat tcatgaatct aagcggcaac gccgtacgtt attggatgca aaaagaaaac       240
     attccattag aaaacgtatt aatcattgta gatgacttag cacttccctt cggtacctta       300
     cgcctgaaaa gcaaaggcag tgatgccggt cataacggat taaaacacat cgcaactatc       360
     ttgggcaccc aaaactatgc gcgcttgaga tttggtatcg gtaatgattt tccaagaggc       420
     ggacaaatag actttgtatt ggggcatttc acggacgaag actggaaaac aatggatgaa       480
     cgtttggaaa cagccggaga aatcgccaaa agcttctgtt tggcaggtat cgacatcacg       540
     atgaatcagt tcaacaaaaa ataa                                              564
//
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