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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH06076; SV 1; linear; genomic DNA; STD; PRO; 969 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative exported glycosylhydrolase
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..969
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             CR626927.1:358188..359156
FT                   /transl_table=11
FT                   /locus_tag="BF0303"
FT                   /product="putative exported glycosylhydrolase"
FT                   /note="Similar to Butyrivibrio fibrisolvens
FT                   xylosidase/arabinosidase [includes: beta-xylosidase (EC
FT                   3.2.1.37) (1,4-beta-d-xylan xylohydrolase) (xylan
FT                   1,4-beta-xylosidase); alpha-l- arabinofuranosidase (EC
FT                   3.2.1.55) (arabinosidase)] XylB SWALL:XYLB_BUTFI
FT                   (SWALL:P45982) (517 aa) fasta scores: E(): 9.2e-10, 29.41%
FT                   id in 289 aa, and to Bacteroides thetaiotaomicron
FT                   endo-1,4-beta-xylanase D precursor BT2898 SWALL:AAO78004
FT                   (EMBL:AE016938) (327 aa) fasta scores: E(): 6.6e-52, 49.24%
FT                   id in 266 aa"
FT                   /db_xref="GOA:Q5LIF0"
FT                   /db_xref="InterPro:IPR006710"
FT                   /db_xref="UniProtKB/TrEMBL:Q5LIF0"
FT                   /protein_id="CAH06076.1"
FT                   /translation="MGKKKISTGVWLLGLLIVFCSYTGVAGAKNRSKTKTVTKSVPLGD
FT                   PFILLHDGTYYAYGTHAADGIEVYTSKDLRKWKLHGLALHKDDVWADSRFWAPEIYEID
FT                   GKFYMYYTADEHICVAIADSPLGPFRQNEKKPMVAGEKMIDSSLFIDEDGKPYLFFVRF
FT                   NDGNNVWVAELEDDYMTIKTETMRPCIHVSQAWEEVWPRVNEGSYVLKHNGLYYMTYSG
FT                   NSFESPFYGIGCATATDIMGEWTKYQENPILQKPGNLQGVGHSAMFKDKKGRLRIVYHA
FT                   HKDKEHIHPRGMYIGKVYFEKVDGIDRMRINKEYIAAELVE"
XX
SQ   Sequence 969 BP; 280 A; 173 C; 268 G; 248 T; 0 other; 2112867019 CRC32;
     atgggaaaga aaaagattag taccggagta tggctgctgg ggctgctgat tgtgttttgc        60
     tcttatacag gagttgccgg agcaaaaaac aggtcaaaaa caaaaaccgt gacaaagtcg       120
     gttccgttgg gcgatccttt tattctattg cacgatggaa cttattatgc ttacggaacg       180
     catgcggccg acggtattga agtgtataca tcaaaagatc tcaggaagtg gaaactgcac       240
     gggctggcac ttcataaaga tgatgtttgg gcggatagcc gcttctgggc accggagatt       300
     tacgagatcg acgggaagtt ttatatgtat tatacggcag acgaacacat ctgtgtggcc       360
     atagccgatt ctccgttagg tccgttcagg cagaacgaga agaaaccgat ggttgctggc       420
     gagaagatga tcgatagctc cctgtttatc gatgaagatg gaaaacctta tcttttcttc       480
     gttcgcttca atgatggcaa taacgtatgg gtagcggaat tggaggacga ttatatgacg       540
     attaaaacgg agacgatgcg tccttgcatt catgtttcgc aggcatggga agaagtgtgg       600
     ccgcgtgtga atgaaggatc ttatgtgctt aaacataacg gattgtatta catgacttat       660
     tccggtaaca gctttgagag cccattctat gggatcggat gtgccaccgc tacggatatc       720
     atgggggaat ggaccaaata ccaggaaaat ccgattttgc agaaaccggg gaatttgcag       780
     ggagtggggc atagtgccat gttcaaggat aaaaagggca gacttcgcat tgtttatcat       840
     gcgcataaag ataaagagca tattcatcca cggggcatgt acatcggtaa ggtctatttt       900
     gaaaaagtgg atggtataga ccgcatgcgg atcaacaagg aatatattgc tgcggaattg       960
     gtcgaataa                                                               969
//
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