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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAH06031; SV 1; linear; genomic DNA; STD; PRO; 1335 BP.
XX
PA   CR626927.1
XX
DE   Bacteroides fragilis NCTC 9343 putative
DE   UDP-N-acetylmuramoylalanine--D-glutamate ligase
XX
OS   Bacteroides fragilis NCTC 9343
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=272559;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1335
FT                   /organism="Bacteroides fragilis NCTC 9343"
FT                   /strain="ATCC 25285 = NCTC 9343"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR626927.1:285546..286880)
FT                   /transl_table=11
FT                   /gene="murD"
FT                   /locus_tag="BF0256"
FT                   /product="putative UDP-N-acetylmuramoylalanine--D-glutamate
FT                   ligase"
FT                   /EC_number="6.3.2.9"
FT                   /note="Similar to Bacillus subtilis
FT                   UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
FT                   SWALL:MURD_BACSU (SWALL:Q03522) (451 aa) fasta scores: E():
FT                   1.3e-43, 35.63% id in 449 aa, and to Bacteroides
FT                   thetaiotaomicron UDP-N-acetylmuramoylalanine--D-glutamate
FT                   ligase BT3450 SWALL:Q8A256 (EMBL:AE016940) (413 aa) fasta
FT                   scores: E(): 1.1e-143, 91.52% id in 413 aa, and to
FT                   Thermoanaerobacter tengcongensis
FT                   UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD or
FT                   TTE1647 SWALL:MURD_THETN (SWALL:Q8R9G4) (450 aa) fasta
FT                   scores: E(): 4.7e-48, 38.22% id in 450 aa"
FT                   /db_xref="GOA:Q5LIJ5"
FT                   /db_xref="InterPro:IPR005762"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5LIJ5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAH06031.1"
FT                   /translation="MKRIVVLGAGESGAGAAVLAKVKGFDTFVSDMSAIKDKYKTLLDG
FT                   HGIAWEEGRHTEEQILSADEVVKSPGIPNDAPLILRLREQGTPIISEIEFAGRYTDAKM
FT                   ICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGKSLALQVAEEKHDYYVIELSSFQLD
FT                   NMYNFRADIAVLMNITPDHLDRYDHCMQNYINAKFRITQNQTSEDAFIFWNDDPIIKRE
FT                   LDKHGIRAHLYPFSAIKEEGSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAA
FT                   GISANLAGITKEDIRKALSDFQGVEHRLEKVARVRGIDFINDSKATNVNSCWYALQSMT
FT                   TKTVLILGGKDKGNDYTEIEELVREKCSALVYLGLHNEKLHEFFDRLGLPVAEVQTGMK
FT                   DAVEAAYKLAKKGETVLLSPCCASFDLFKSYEDRGEQFKKYVREL"
XX
SQ   Sequence 1335 BP; 412 A; 289 C; 322 G; 312 T; 0 other; 2857775875 CRC32;
     atgaaaagaa ttgtagtatt aggagccggt gaaagcggtg cgggagcagc cgttctggcc        60
     aaagtaaaag gattcgatac tttcgtatcg gatatgtctg ctatcaagga taagtataaa       120
     actctccttg acggccatgg cattgcctgg gaagaaggcc gacacacaga agaacagatt       180
     ttgagtgctg acgaagttgt gaaaagcccc ggaattccta atgacgcccc actgattctg       240
     agattgagag aacagggcac acctatcatc tcggaaatag aatttgccgg cagatacacc       300
     gatgccaaaa tgatctgtat caccggctcg aacggaaaga cgaccacaac ctcgcttatc       360
     tatcacattt ttaaaagcgc aggactaaat gtgggacttg ccggaaacat cggtaaaagc       420
     ctggcattgc aagtggccga agagaaacat gattattatg taatcgaatt gagttcattc       480
     cagttggata acatgtataa cttccgtgcc gatatcgctg tattgatgaa cattacgccg       540
     gaccatctgg accggtacga ccattgtatg cagaactata ttaatgcaaa gtttcgtatt       600
     acgcagaatc agacttcgga agacgcgttt atcttctgga acgatgaccc tatcatcaaa       660
     cgtgaactgg acaaacatgg cattcgtgcc cacctgtatc cattctcggc aatcaaagaa       720
     gaaggatcta tcgcctatgt ggaagaccat gaagtagtaa ttaccgaacc gatcgctttc       780
     aatatggaac aggaacagtt ggccctgacc ggccaacaca atctttataa ctctttagcc       840
     gccggtatct ccgccaacct tgccggtatc accaaagaag atataaggaa agcgctcagt       900
     gactttcagg gggtagaaca ccgcctggag aaggtggcac gcgtacgtgg cattgatttt       960
     atcaatgact ccaaagcaac caatgtaaac tcttgctggt atgccttgca gagtatgact      1020
     actaaaacgg tattgattct cggaggaaaa gacaagggaa acgattatac ggaaatagaa      1080
     gaactggtac gggaaaaatg ctcggcactg gtctacctgg gattgcacaa cgaaaagctt      1140
     catgagtttt tcgaccgtct cggactccct gtagccgaag tacagaccgg catgaaggat      1200
     gccgtagaag cggcttacaa gctggcgaaa aagggcgaaa cagtattgtt gagtccatgt      1260
     tgcgcctcct ttgacctttt caaaagctat gaagaccgtg gcgaacagtt taagaagtat      1320
     gtaagagaat tataa                                                       1335
//
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