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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAG23605; SV 1; linear; genomic DNA; STD; PRO; 1707 BP.
XX
PA   CR378680.1
XX
DE   Photobacterium profundum putative choline dehydrogenase
XX
OS   Photobacterium profundum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=74109;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1707
FT                   /organism="Photobacterium profundum"
FT                   /chromosome="2"
FT                   /strain="ss9"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR378680.1:157449..159155)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="VPA1112"
FT                   /locus_tag="PBPRB1745"
FT                   /product="putative choline dehydrogenase"
FT                   /note="predicted by orpheus program"
FT                   /note="predicted by glimmer program"
FT                   /db_xref="GOA:Q6LGH5"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6LGH5"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAG23605.1"
FT                   /translation="MNTTYDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGSDRSIFI
FT                   QMPTALSYPMNSEKYAWQFETQPEAGLDSRSLHCPRGRVLGGSSSINGMVYVRGHACDY
FT                   DEWVEQGAEGWSYQECLPYFRRAESWIHGEDTYRGGDGPVGTCNGNDMELNPLYQAFID
FT                   AGQQAGYPKTDDYNGYQQEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTR
FT                   KVLIKNKQAIGVEIEVGGKVQSVYANTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAGIA
FT                   VKHDLPGVGENLQDHLEVYFQYACHQPITLNSKLGLISKGLIGTRWILQKDGLGATNHF
FT                   ESCAFIRSRAGLKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHVGPNKPQSRGRIWITSA
FT                   DPHQKPNIEFNYISTEQDKQDWRDCIRLTREILAQPAMDDYRGEEIQPGADITSDEAMD
FT                   AWVRQNVESAYHPSCTCKMGSDNDPMTVLNKDCQVRGIDSLRVIDSSVFPTIPNGNLNA
FT                   PTIMVAEKAADAILGNTPLSPSNAPTWIAPQWETEQRNGAAQRPMFHQQRK"
XX
SQ   Sequence 1707 BP; 476 A; 377 C; 424 G; 430 T; 0 other; 2857034012 CRC32;
     atgaacacaa cgtatgatta catcattgtc ggcgcgggat ctgcgggctg tgtgttggcc        60
     gaccgtttaa gtgcttcggg tgaacattac atcttactgc ttgaagcggg gggaagtgac       120
     agaagtatct ttattcaaat gccaaccgca ttgtcatacc caatgaacag tgaaaaatat       180
     gcatggcaat tcgaaacaca acctgaggca ggtcttgata gccgcagcct gcattgtccg       240
     cgaggacgtg ttctgggtgg cagttcttcg atcaacggta tggtgtatgt gcgtggccat       300
     gcttgcgatt atgatgagtg ggtagagcag ggtgctgaag gctggagtta ccaagaatgt       360
     ctgccgtatt ttcgtcgtgc tgaatcatgg attcatggag aagacaccta ccgcggaggt       420
     gatggtcctg ttggtacatg caatggtaac gatatggaac taaatccact atatcaagcg       480
     tttatcgatg ctggccaaca agcaggctac ccgaaaactg atgactataa tggctatcag       540
     caagaaggtt ttggccctat gcatatgacc gttgataaag gtatacgtgc ctctacttca       600
     aatgcttacc ttcgccgcgc tatgaaacgc agcaacctga cagtgagaaa gggtgttgta       660
     actcgtaagg tattgatcaa aaacaaacag gcgataggtg ttgagataga agtcggcggt       720
     aaagtgcagt ctgtttatgc gaacaccgaa gtgttgttat cggcgggctc agtcggttct       780
     ccgcaacttc ttcaattatc gggcattggt cctaaagcag tattagaaca agctggtatt       840
     gctgttaaac atgatttacc gggtgttggt gaaaatctgc aagatcacct tgaagtgtat       900
     ttccaatatg cctgtcacca gcctattacc ctgaacagta aattggggct tattagcaaa       960
     gggttgattg gtacgcgttg gatattgcaa aaagatggct tgggtgcaac caaccatttt      1020
     gaatcatgcg cctttatccg ctctcgtgca ggtctaaaat ggccaaatat tcagtatcac      1080
     ttcttgcctg cagccatgcg atatgacggc caagccgcct ttgatggtca tggtttccaa      1140
     gtacatgttg gtccgaacaa accgcaaagc cgtggccgta tttggataac atcagccgat      1200
     ccgcaccaaa agccgaacat tgaatttaac tatatcagca ctgaacaaga taaacaggac      1260
     tggcgcgatt gcatccgtct aacgcgtgaa attctggctc agccagccat ggatgattat      1320
     cgcggtgaag aaattcaacc aggtgcagat attaccagtg atgaagcgat ggatgcttgg      1380
     gttcgccaaa atgtggaaag tgcctaccac ccgtcttgta cttgtaaaat gggatcagat      1440
     aatgatccaa tgacagtgct gaataaagat tgtcaggtca gaggcatcga ctctttacga      1500
     gtgatcgatt cttcagtatt cccaaccatc cctaatggca accttaatgc tccaaccatt      1560
     atggtggccg aaaaagcagc cgatgccatc ttagggaata caccactctc accatcaaac      1620
     gcgccgacgt ggatcgcgcc gcaatgggaa acagaacaac gtaacggtgc cgctcaacgc      1680
     cctatgtttc accaacaaag aaaataa                                          1707
//
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