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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAG21862; SV 1; linear; genomic DNA; STD; PRO; 1542 BP.
XX
PA   CR378674.1
XX
DE   Photobacterium profundum Putative AtpA, ATP synthase F1, alpha subunit
XX
OS   Photobacterium profundum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=74109;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1542
FT                   /organism="Photobacterium profundum"
FT                   /chromosome="1"
FT                   /strain="ss9"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CR378674.1:242235..243776)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="YPO4123"
FT                   /locus_tag="PBPRA3606"
FT                   /product="Putative AtpA, ATP synthase F1, alpha subunit"
FT                   /note="predicted by orpheus program"
FT                   /note="predicted by glimmer program"
FT                   /db_xref="GOA:Q6LLG6"
FT                   /db_xref="InterPro:IPR000194"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6LLG6"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAG21862.1"
FT                   /translation="MQLNSTEISALIKQRIEKFNVASEARNEGTIVSVSDGIIRIHGLA
FT                   DVMQGEMIELPGGRFALALNLERDSVGAVVMGPYANLQEGMKVTGTGRILEVPVGPALL
FT                   GRVVNTLGEPIDGKGPIETETFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQ
FT                   RELIIGDRQTGKTAMAIDAIINQKQSGIYSVYVAIGQKASTIANVVRKLEEHGALDNTI
FT                   VVVASASEAAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPP
FT                   GREAFPGDVFYLHSRLLERASRVSENYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAF
FT                   VPTNVISITDGQIFLQTELFNAGIRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQ
FT                   YRELAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQYAPMSVFEQAVVIFSAERGYLVD
FT                   VELAKLADFEAALLSYAKGQSAELVSQIDETGAWNSEIEAQFVKLVEDFKATQTW"
XX
SQ   Sequence 1542 BP; 389 A; 317 C; 399 G; 437 T; 0 other; 3114496443 CRC32;
     atgcaactta attccacgga aattagcgca ctgatcaagc aacgtattga aaaattcaat        60
     gttgcaagtg aagcgcgcaa cgaaggtact atcgtttcgg taagtgacgg tatcattcgt       120
     atccatggcc ttgctgatgt aatgcaaggt gaaatgattg aattacctgg tggccgtttt       180
     gcactggcac ttaaccttga gcgtgactcg gttggtgctg ttgtaatggg tccatatgct       240
     aaccttcagg aaggcatgaa agtaacaggt actggtcgta ttcttgaagt acccgttggt       300
     ccggcactac ttggccgtgt ggtgaacacg ctaggtgagc cgatcgatgg caagggtcca       360
     attgaaacag agacattttc tcctgttgaa gtaatcgccc cgggtgtaat cgagcgtaag       420
     tcagttgatc agccggttca gacgggctac aaagctgtcg attcgatgat ccctatcggt       480
     cgtggtcagc gtgagttgat catcggtgac cgtcagacgg gtaaaacggc aatggctatc       540
     gatgccatta tcaaccagaa acaatctggt atttattctg tttacgttgc tattggtcag       600
     aaagcttcaa ctatcgcgaa cgttgtgcgt aagctagaag agcacggcgc attggataac       660
     accattgtgg ttgtagcatc agcatctgaa gctgcggcat tgcaatacct tgcgccatac       720
     tcaggttgtg caatgggtga atacttccgt gatcgcggtg aagatgcact gattgtatac       780
     gatgatttgt caaagcaagc tgttgcttac cgtcaaattt cactattgct taagcgtccg       840
     ccgggtcgtg aagcattccc tggtgacgtt ttctatttac actctcgtct gttagagcgt       900
     gcatctcgtg taagcgagaa ttatgtagaa aagttcacta atggtgaagt taaaggtaag       960
     actggttccc taacggcgct tccgattatc gaaacgcaag cgggggatgt atcagcattc      1020
     gtaccgacta acgttatttc catcactgat ggtcagatct tcctgcaaac agaattgttc      1080
     aacgctggta ttcgccctgc ggttgatccg ggtatttctg tttcgcgtgt aggtggttct      1140
     gctcaaacta agatcattaa gaaactgtca ggtggtattc gtactgcact tgcacagtat      1200
     cgtgaactag cggctttcgc ccagttctcg tctgaccttg atgaagcaac gaagaaacag      1260
     cttgatcacg gtcagaaagt gactgagttg atgaagcaga agcagtatgc gccgatgtct      1320
     gtatttgagc aggcggttgt tatcttctct gctgaaagag gctatttggt tgatgttgag      1380
     cttgctaagc ttgctgattt cgaagctgcg ttgctttcat atgccaaagg tcaatctgct      1440
     gagctagtgt ctcagattga tgaaacgggt gcctggaaca gtgaaattga agctcagttt      1500
     gtaaaactgg ttgaagattt caaagctacc caaacttggt aa                         1542
//
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