spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE55361; SV 1; linear; genomic DNA; STD; PRO; 1008 BP.
XX
PA   BX842575.1
XX
DE   Mycobacterium tuberculosis H37Rv PROBABLE LYTB-RELATED PROTEIN LYTB2
XX
OS   Mycobacterium tuberculosis H37Rv
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=83332;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1008
FT                   /organism="Mycobacterium tuberculosis H37Rv"
FT                   /strain="H37Rv"
FT                   /mol_type="genomic DNA"
FT   CDS             BX842575.1:202398..203405
FT                   /transl_table=11
FT                   /gene="lytB2"
FT                   /locus_tag="Rv1110"
FT                   /product="PROBABLE LYTB-RELATED PROTEIN LYTB2"
FT                   /function="NOT KNOWN. IN OTHER ORGANISMS, LYTB PRODUCT IS
FT                   INVOLVED IN PENICILLIN TOLERANCE AND CONTROL OF THE
FT                   STRINGENT RESPONSE."
FT                   /note="Rv1110, (MTV017.63), len: 335 aa. Probable lytB2,
FT                   LytB-related protein, equivalent to AL049491|MLCB1222_3
FT                   from Mycobacterium leprae (335 aa), FASTA score: (82.9%
FT                   identity in 333 aa overlap). Also similar to LytB proteins
FT                   from many bacteria (appears to have N-terminal extension)
FT                   e.g. P22565|LYTB_ECOLI|B0029|Z0034|ECS0032 LYTB PROTEIN
FT                   from Escherichia coli strains K12 and O157:H7 (316 aa),
FT                   FASTA scores: opt: 1041, E():0, (52.4% identity in 309 aa
FT                   overlap); etc. Also very similar to another LytB-related
FT                   protein from Mycobacterium tuberculosis:
FT                   LytB1|Rv3382c|MTV004.40c (329 aa), FASTA scores: opt: 975,
FT                   E(): 0, (51.3% identity in 312 aa overlap). BELONGS TO THE
FT                   LYTB FAMILY. TBparse score is 0.899."
FT                   /db_xref="GOA:P0A5I0"
FT                   /db_xref="InterPro:IPR003451"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A5I0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE55361.1"
FT                   /translation="MVPTVDMGIPGASVSSRSVADRPNRKRVLLAEPRGYCAGVDRAVE
FT                   TVERALQKHGPPVYVRHEIVHNRHVVDTLAKAGAVFVEETEQVPEGAIVVFSAHGVAPT
FT                   VHVSASERNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHV
FT                   QLVDGVDAVDQVTVRDEDKVVWLSQTTLSVDETMEIVGRLRRRFPKLQDPPSDDICYAT
FT                   QNRQVAVKAMAPECELVIVVGSRNSSNSVRLVEVALGAGARAAHLVDWADDIDSAWLDG
FT                   VTTVGVTSGASVPEVLVRGVLERLAECGYDIVQPVTTANETLVFALPRELRSPR"
XX
SQ   Sequence 1008 BP; 161 A; 303 C; 361 G; 183 T; 0 other; 1809468406 CRC32;
     atggttccga cggtcgacat ggggattccc ggggcttcgg tatcgtcgcg atcggtggcc        60
     gaccgtccca accgtaagcg ggtgctgctg gccgagccgc gtggctactg cgctggcgtg       120
     gatcgggccg tcgaaacggt cgaacgcgcg cttcaaaaac acggcccgcc tgtctacgtg       180
     cgtcacgaga tcgtgcataa ccgccacgtg gttgacaccc tggctaaggc cggtgcggtt       240
     ttcgtcgaag agaccgagca ggttcccgag ggagcgattg tggtgttctc cgcgcacggg       300
     gtcgcgccta cggtgcacgt cagcgccagc gagcgcaacc tgcaggtcat tgacgccacc       360
     tgcccgctgg tcaccaaggt gcacaacgag gccaggcggt tcgcccggga cgactacgac       420
     atcttgctga tcggtcatga gggccacgag gaagtcgtcg gtactgctgg ggaagctccc       480
     gatcatgtgc agctggtcga cggggtggac gccgtcgacc aggtgaccgt ccgtgacgag       540
     gacaaagtgg tttggctgtc gcagaccacc ctgtccgtcg atgagaccat ggagattgtc       600
     gggcggttgc gtcggcgttt ccccaagctg caggatccgc ccagcgacga catctgctat       660
     gcgacccaga atcggcaggt cgcggtcaag gcgatggcgc ccgagtgcga gctggtcatc       720
     gtggtcggct cgcgcaattc gtcgaattcg gttcggctgg tcgaggtggc gctgggtgcc       780
     ggggcgcggg ccgcccacct ggtggactgg gccgacgata tcgactcggc ctggctggac       840
     ggcgttacca cggtcggcgt tacgtcgggg gcatcggtcc ccgaggtgct ggtgcgcggt       900
     gtgctggagc ggctggccga atgcggctac gacatcgtgc aaccggtgac aacggccaac       960
     gagacgttgg tgttcgcatt gccccgggag ctccgctcac ctcgctga                   1008
//
spacer
spacer