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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE44880; SV 1; linear; genomic DNA; STD; PRO; 513 BP.
XX
PA   BX640412.1
XX
DE   Bordetella pertussis polypeptide deformylase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..513
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX640412.1:212708..213220)
FT                   /transl_table=11
FT                   /gene="def"
FT                   /gene_synonym="fms"
FT                   /locus_tag="BP0552"
FT                   /product="polypeptide deformylase"
FT                   /EC_number="3.5.1.31"
FT                   /note="Similar to Escherichia coli polypeptide deformylase
FT                   Def or Fms or B3287 SW:DEF_ECOLI (P27251) (168 aa) fasta
FT                   scores: E(): 8.2e-32, 53.846% id in 169 aa, and to
FT                   Neisseria meningitidis polypeptide deformylase Def or
FT                   Nma0164 or Nmb0110 TR:Q9JQN0 (EMBL:AL162752) (167 aa) fasta
FT                   scores: E(): 6.1e-38, 64.848% id in 165 aa. Also similar to
FT                   BP0039, 40.881% identity (44.218% ungapped) in 159 aa
FT                   overlap."
FT                   /db_xref="GOA:Q7VS88"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VS88"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE44880.1"
FT                   /translation="MALLSILRYPDPRLHKTAKPVAVVDDRIRQLVRDMADTMYDAPGV
FT                   GLAATQVDVHERVVVIDVSEEGNDLRVLINPEITWKSDERQTYEEGCLSVPGIYDEVER
FT                   AARIRCKALDQQGQPYEFEADGLLAVCVQHEIDHLDGKVFVEYLSNLKQNRIKTKLKKA
FT                   EREAERA"
XX
SQ   Sequence 513 BP; 102 A; 168 C; 167 G; 76 T; 0 other; 2050655254 CRC32;
     atggctttgc tttccatcct tcgttatccc gacccgcgcc tgcacaagac ggccaagccg        60
     gtcgcggtgg tggacgaccg catccggcag ctggttcgcg acatggccga caccatgtac       120
     gatgcgccgg gcgtcgggct ggcggccacc caggtcgacg tgcacgagcg cgtcgtggtg       180
     atcgacgtct cggaagaggg caacgacctg cgcgtgctga tcaaccccga gatcacctgg       240
     aagagcgacg aacgccagac ctacgaggaa ggctgtctgt cggtgcccgg catctacgac       300
     gaggtcgagc gcgccgcgcg catccgctgc aaggcgctgg accagcaagg ccagccctac       360
     gagttcgagg ccgacggcct gctggccgtg tgcgtgcagc acgagatcga ccatctcgat       420
     ggcaaggtgt tcgtcgaata cctgtccaac ctcaagcaga accgcatcaa gaccaagctc       480
     aagaaggccg agcgcgaggc cgagcgcgcc tag                                    513
//
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