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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE44801; SV 1; linear; genomic DNA; STD; PRO; 693 BP.
XX
PA   BX640412.1
XX
DE   Bordetella pertussis 3,4-dihydroxy-2-butanone 4-phosphate synthase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..693
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640412.1:135836..136528
FT                   /transl_table=11
FT                   /gene="ribB"
FT                   /gene_synonym="htrP"
FT                   /locus_tag="BP0471"
FT                   /product="3,4-dihydroxy-2-butanone 4-phosphate synthase"
FT                   /note="Similar to Escherichia coli 3,4-dihydroxy-2-butanone
FT                   4-phosphate synthase RibB or HtrP or B3041 or Z4399 or
FT                   Ecs3929 SW:RIBB_ECOLI (P24199) (217 aa) fasta scores: E():
FT                   1.3e-39, 57.843% id in 204 aa, and to Vibrio cholerae
FT                   3,4-dihydroxy-2-butanone 4-phosphate synthase Vca1060
FT                   TR:Q9KKP2 (EMBL:AE004431) (218 aa) fasta scores: E():
FT                   3.9e-38, 57.214% id in 201 aa"
FT                   /db_xref="GOA:Q7VSF4"
FT                   /db_xref="InterPro:IPR000422"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VSF4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE44801.1"
FT                   /translation="MSNVVPTPVFPLFAQPFATRLERALQHLRIGRPVILMDDFDRENE
FT                   ADLIVAADKLTVPVMAQLIRDGSGIVCLCLPGETLDRLELPPMVDSNRSRYSTAFTVSI
FT                   EAREGVTTGVSAVDRVTTIRAAIAPGARSGDVVSPGHVFPLRAQPGGVLTRRGHTEGSV
FT                   DLAALAGLRPAGVLCELMNADGTMMRGASLERYAAKEGLVALAIDELAAHLQARGATGA
FT                   PAELAVAA"
XX
SQ   Sequence 693 BP; 100 A; 261 C; 230 G; 102 T; 0 other; 3349707590 CRC32;
     atgtccaacg tcgttcccac ccctgttttc cccctgttcg cccagccttt cgccacgcgc        60
     ctggagcgcg ccctgcagca cctgcgcatc ggccgccccg tcatcctgat ggacgatttc       120
     gatcgcgaga acgaagccga cctgatcgtc gcggccgaca agctgaccgt gcccgtcatg       180
     gcgcaactga tccgcgacgg cagcggcatc gtgtgcctgt gcctgccggg cgaaaccctc       240
     gaccgcctgg agctgccgcc catggtcgac agtaaccgca gccggtactc gacggccttt       300
     acggtgtcca tcgaggcacg cgaaggcgtg accaccggcg tgtcggcggt cgatcgcgtc       360
     accaccatcc gtgccgccat cgcgccgggc gcgcgcagcg gcgacgtggt cagccccgga       420
     cacgtattcc cgctgcgcgc gcagccaggc ggtgtgctga cgcggcgcgg ccacaccgaa       480
     ggctcggtgg acctggcggc cctggcgggc ctgcgcccgg ccggcgtgct gtgcgaactg       540
     atgaatgccg acggcacgat gatgcgcggc gcgtcgctcg agcgctacgc cgccaaagaa       600
     ggcctggtcg ccctggccat cgacgaactg gcggcgcatc tgcaagcgcg tggcgccacc       660
     ggcgcgccgg ccgaactggc cgtcgccgcc tga                                    693
//
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