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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE44781; SV 1; linear; genomic DNA; STD; PRO; 1191 BP.
XX
PA   BX640412.1
XX
DE   Bordetella pertussis succinylornithine transaminase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1191
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX640412.1:109277..110467)
FT                   /transl_table=11
FT                   /gene="argM"
FT                   /gene_synonym="astC"
FT                   /gene_synonym="cstC"
FT                   /locus_tag="BP0451"
FT                   /product="succinylornithine transaminase"
FT                   /EC_number="2.6.1.-"
FT                   /note="Similar to Escherichia coli succinylornithine
FT                   transaminase ArgM or AstC or CstC or B1748 SW:ARGM_ECOLI
FT                   (P77581) (406 aa) fasta scores: E(): 1.9e-57, 44.503% id in
FT                   382 aa, and to Pseudomonas aeruginosa probable class III
FT                   pyridoxal phosphate-dependent aminotransferase Pa0530
FT                   TR:Q9I606 (EMBL:AE004489) (393 aa) fasta scores: E():
FT                   2e-65, 48.438% id in 384 aa"
FT                   /db_xref="GOA:Q7VSH3"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VSH3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE44781.1"
FT                   /translation="MEFSQFKVNALMEITARPDLVFVRGQGSWLEDHAGKRYLDFVQGW
FT                   AVNTLGHCAPEMKRAMAEQADKLMNPSPAFYNLPSIELAQRLTSASCFDRVFFANSGAE
FT                   ANEGAIKLARKWGRVNRNGAYKIITMNHGFHGRTLATMSASGKPGWDTMFAPQVEGFPK
FT                   AEINDLDSVRALIDAQTVAVMLEPVQGEAGVIPATREFMQGLRKLADEHGILFIVDEVQ
FT                   TGMGRTGSLFAYQQFDVIPDIMTLAKGIGGGIPLAALLAREEVCVFAHGDQGGTYNGNP
FT                   LCAAVGVAVFDTITAPGFMEAAQARTRQLSEGLLALSAKWSLRGERGMGLLRALVLDRD
FT                   DAPAIVEAARMLAPEGLLLNAPRGNLLRFMPALNVTEADMARMLEQLDGVIAAVRK"
XX
SQ   Sequence 1191 BP; 197 A; 399 C; 414 G; 181 T; 0 other; 2027386564 CRC32;
     atggaattca gccagttcaa agtcaacgcc ctcatggaga tcaccgcccg cccggacctg        60
     gtgttcgtgc gaggtcaggg ttcctggctg gaggaccatg ccggcaagcg atatctcgac       120
     ttcgtgcaag gctgggccgt caacacgctg ggccactgcg cgcccgagat gaagcgcgcg       180
     atggccgagc aggccgacaa gctgatgaac ccgtcgccgg cgttctacaa cctgccgtcg       240
     atcgagctgg cgcagcgcct gacctcggca tcgtgtttcg accgggtgtt cttcgccaac       300
     agcggcgcgg aggccaacga aggcgccatc aagctggcgc gcaaatgggg gcgcgtgaac       360
     cgtaacggcg cctacaagat catcaccatg aaccacggct tccatggccg cacgctggcc       420
     accatgtcgg cctcgggcaa gccgggctgg gacacgatgt tcgcgccgca ggtggagggc       480
     tttcccaagg ccgagatcaa tgatctcgac tcggtgcgcg ccctgatcga cgcgcagacg       540
     gtggccgtga tgctcgagcc cgtgcagggc gaagccggcg tgatcccggc cacgcgcgag       600
     ttcatgcagg gcctgcgcaa gctggccgac gagcacggca tcctgttcat cgtcgacgaa       660
     gtgcagaccg gcatgggccg caccggctcg ctgttcgcgt accagcaatt cgacgtgatc       720
     ccggacatca tgacgctggc caagggcatc ggcggcggca ttccgctggc cgccctgctg       780
     gcgcgcgagg aggtctgcgt gttcgcgcac ggcgaccagg gcggcaccta caacggcaac       840
     cccttgtgcg cggcggtcgg cgtggcggtg ttcgacacta tcaccgcgcc gggcttcatg       900
     gaggcggcgc aggcgcgcac gcgccagttg tccgaaggcc tgctggcgct gtcggccaag       960
     tggagcctgc gcggcgagcg cggcatgggc ctgctgcgcg ccctggtgct ggaccgcgac      1020
     gacgccccgg ccatcgtcga ggccgcgcgc atgctggcgc cggagggcct gctgctgaac      1080
     gcgccgcgcg gcaatctgct gcgcttcatg ccggcgctga acgtgaccga agccgacatg      1140
     gcccgcatgc tcgagcagct cgacggcgtg atcgccgccg tgcgcaagta a               1191
//
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