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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE43421; SV 1; linear; genomic DNA; STD; PRO; 972 BP.
XX
PA   BX640420.1
XX
DE   Bordetella pertussis putative thymidylate synthase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..972
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640420.1:233971..234942
FT                   /transl_table=11
FT                   /locus_tag="BP3154"
FT                   /product="putative thymidylate synthase"
FT                   /note="Similar to Lactobacillus casei thymidylate synthase
FT                   ThyA SW:TYSY_LACCA (P00469) (316 aa) fasta scores: E():
FT                   2.9e-30, 35.06% id in 328 aa, and to Oryza sativa
FT                   thymidylate synthase thyA TR:Q9ZWF1 (EMBL:AB023402) (322
FT                   aa) fasta scores: E(): 2.7e-27, 33.62% id in 339 aa"
FT                   /db_xref="GOA:Q7VUE3"
FT                   /db_xref="HSSP:1HW4"
FT                   /db_xref="InterPro:IPR000398"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VUE3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE43421.1"
FT                   /translation="MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAV
FT                   TTKKLAFKSAIGEMVGFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGP
FT                   VYGVQWRHWPAYKLLPSSAGGQVADALARGYRQVAEVDENGAPHVLLYKAVDQLRQCLD
FT                   TIRQSPGDRRILFHGWNWAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGT
FT                   PFNLTEGAALLHLVGRLTGYKPRWFSYFIGDAHVYENHLPMLREQLAREPYPAPQLVLS
FT                   DRIPDFAVTGKYEPQWLEQVEPGDFTLSGYQHHAPLTAPMAV"
XX
SQ   Sequence 972 BP; 168 A; 352 C; 305 G; 147 T; 0 other; 2714245280 CRC32;
     atgaaacaat atctagacct cgtccaatcc attctcgacc agggcgcctg gcaggaaaac        60
     cgcaccggcg tgcgcacgct ctcgctgccc ggcgcggcgc tgcgcttcga cctgcagcag       120
     gggtttcccg ccgtcaccac caagaagctg gcgttcaagt ccgccatcgg cgaaatggtg       180
     ggcttcctgc gcgccacgcg cagcgccgcg cagttccgcg cgctgggttg caaggtctgg       240
     gaccagaacg ccaacgagaa cgagcaatgg ctggccaacc cgtaccgcga gggtcccgac       300
     gacctcggcc cggtctacgg cgtccaatgg cgccattggc cggcctacaa gctgctgccg       360
     agcagcgccg gcggccaggt ggccgacgcg ctggcgcgcg gctaccgaca agtggccgag       420
     gtcgacgaaa acggcgcgcc gcacgtgctg ctgtacaagg cggtggacca gttgcgccag       480
     tgcctggaca ccatccgcca atcgccgggc gaccgccgca tcctgttcca tggctggaac       540
     tgggcgcaga tcgaggaaat ggccctgccg ccctgccatc tgctctacca gttcctgccc       600
     aacgccggca cgcgcgaaat ctcgctgtgc ctgtacatcc gctccaacga cgtcggcctg       660
     ggcacgccct tcaacctgac cgagggcgcg gcgctgctgc acctggtcgg ccgcctgacc       720
     ggctacaagc cgcgctggtt cagctatttc atcggcgatg cgcacgtcta cgaaaaccac       780
     ctgccgatgc tgcgcgagca actggcgcgc gagccctatc cggccccgca gctggtgctg       840
     tcggaccgca ttcccgattt cgccgtgacc ggcaagtacg agccgcaatg gctggagcag       900
     gtcgagccgg gcgatttcac gctgagcggc taccagcacc acgcgccgct gaccgccccc       960
     atggcggtct ga                                                           972
//
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