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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE43401; SV 1; linear; genomic DNA; STD; PRO; 1299 BP.
XX
PA   BX640420.1
XX
DE   Bordetella pertussis homogentisate 1,2-dioxygenase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1299
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640420.1:208270..209568
FT                   /transl_table=11
FT                   /gene="hmgA"
FT                   /locus_tag="BP3134"
FT                   /product="homogentisate 1,2-dioxygenase"
FT                   /EC_number="1.13.11.5"
FT                   /note="Similar to Emericella nidulans homogentisate
FT                   1,2-dioxygenase HmgA SW:HGD_EMENI (Q00667) (448 aa) fasta
FT                   scores: E(): 5.1e-89, 53.33% id in 435 aa, and to
FT                   Caulobacter crescentus homogentisate 1,2-dioxygenase Cc2532
FT                   TR:Q9A5B8 (EMBL:AE005921) (425 aa) fasta scores: E():
FT                   6.5e-109, 62.11% id in 425 aa"
FT                   /db_xref="GOA:Q7VUG2"
FT                   /db_xref="HSSP:1EYB"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VUG2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE43401.1"
FT                   /translation="MSLHYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTA
FT                   FTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQRWLSDFGRQPVTPNQLRWSPLPMPDAP
FT                   TDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATE
FT                   LGLIDIEPYEIAVVPRGVRLRVELLDDVARGYVLENFGTAMRLPELGPIGSNCLANARD
FT                   FQIPVAWYEDVEGDFELIAKFTGGFWRAPITHSPLNVVAWHGTHAPYKYDLRNFNTVGS
FT                   ISYDHPDPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLI
FT                   HGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQAHYIRDTMAFMFETRRV
FT                   IRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA"
XX
SQ   Sequence 1299 BP; 218 A; 494 C; 387 G; 200 T; 0 other; 3484533216 CRC32;
     atgtccttgc actatcagac cggcttcggc aacgcctgcg ccaccgaggc cctgcccggc        60
     gccctgcccg ccggccgcaa ttcgccgcag atctgtccct acggcctgta cgccgagcaa       120
     ctgtccggca cggccttcac cgccccgcgc gccgagaatc gccgctcctg gctgtaccgc       180
     atccgtccgg gcgtgcagca cctgccgttc gcgccgttcg ccggcgcgca gcgctggctg       240
     agcgacttcg gccgccagcc ggtcacgccc aaccagttgc gctggagccc gctgccgatg       300
     ccggacgcgc ccaccgattt catcgacggc atgcacacct ggggcggcaa cggcggcccc       360
     gaggagcaaa gcggcgtggg catccacctg tacgcggcca accgctcgat gcaggggcgc       420
     ttcttctaca acgccgacgg cgaaatgctg atcgtgccgc agcagggccg cctgcgcctg       480
     gccaccgagc tgggcctgat cgacatcgaa ccctatgaaa tcgccgtcgt cccgcgcggc       540
     gtgcgcctgc gcgtcgaact gctcgacgac gtggcgcgcg gctacgtgct ggagaacttc       600
     ggcacggcca tgcgcctgcc ggaactgggc cccatcggct cgaactgcct ggccaacgcg       660
     cgcgacttcc agatcccggt ggcctggtac gaagacgtcg agggcgattt cgagctcatc       720
     gccaagttca ccggcggctt ctggcgcgcg ccgatcaccc attcgccgct gaacgtggtg       780
     gcctggcacg gcacgcacgc gccctacaag tacgacctgc gcaacttcaa cacggtcggt       840
     tcgatcagct acgaccaccc cgatccgtcg atcttcaccg tgctgacgtc gccctcggac       900
     accccgggca ccgcgaacat ggatttcgcc atcttcccgc cgcgcatcct ggcgatggag       960
     aacacgttcc gtccgccctg gttccaccgc aatatcgcca gcgaattcat gggcctgatc      1020
     cacggcgtct acgacgccaa ggccgaaggc ttcgcgccgg gcggcgccag cctgcacaac      1080
     tgcatgagcg gccatggccc ggacgccgat accttcgaga aagccagcca cgccgatacc      1140
     agccaggccc actacattcg cgataccatg gccttcatgt tcgagacgcg ccgcgtgatc      1200
     cgccccacgg cgcaggccct ggcttcgccc cagcgccagg atgactacta tcagtgctgg      1260
     cagggattgc agaagcactt cgaccccgaa caggcctga                             1299
//
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