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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE43071; SV 1; linear; genomic DNA; STD; PRO; 1863 BP.
XX
PA   BX640419.1
XX
DE   Bordetella pertussis 1-deoxy-D-xylulose 5-phosphate synthase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1863
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX640419.1:190337..192199)
FT                   /transl_table=11
FT                   /gene="dxs"
FT                   /locus_tag="BP2798"
FT                   /product="1-deoxy-D-xylulose 5-phosphate synthase"
FT                   /note="Similar to many including: Escherichia coli
FT                   1-deoxy-D-xylulose 5-phosphate synthase Dxs or B0420
FT                   SW:DXS_ECOLI (P77488) (619 aa) fasta scores: E(): 4e-136,
FT                   57% id in 614 aa, and to Pseudomonas aeruginosa
FT                   1-deoxy-D-xylulose 5-phosphate synthase Dxs or Pa4044
FT                   SW:DXS_PSEAE (Q9KGU7) (627 aa) fasta scores: E(): 7.8e-143,
FT                   60.09% id in 614 aa"
FT                   /db_xref="GOA:Q7VV87"
FT                   /db_xref="InterPro:IPR005475"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VV87"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE43071.1"
FT                   /translation="MTTELLDRILSPADLRQLDRRELKRLADELRGFVLESVSRTGGHL
FT                   SSNLGTVELSLALHYVFDTPHDRIVWDVGHQSYPHKILTGRREGMAHLRQQGGISGFPK
FT                   RSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAG
FT                   VTPNINLLVVLNDNDMSISPPVGALNRYLARLMSGQFYAAAKNVGRAVLQHVPPVLELA
FT                   RRLEEHAKGMVTPATLFEEFGFNYVGPIDGHDLDALVPTLQNLRALPGLQFLHVVTRKG
FT                   QGYKLAEADPVLYHGPGKFDPAVGIQQAKAPARKTFTQVFGQWLCDMAERDERLVGITP
FT                   AMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQL
FT                   VHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLS
FT                   TCYEHPGPASVRYPRGAGCGAAVGEGLATVPLGKGLVRREGRRIAILGFGTLVQAALGA
FT                   AGQIDAMVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGVTL
FT                   PVLQLGLPDAFIDHGDQAALLAGLGLDAAGIERAIRARFGALLA"
XX
SQ   Sequence 1863 BP; 272 A; 638 C; 660 G; 293 T; 0 other; 2291637466 CRC32;
     atgacgacag aactactgga ccgtatccta tccccggccg acctccggca actggaccgc        60
     cgcgaactca agcggctggc cgacgagttg cgcggcttcg tgctcgagtc ggtgtcgcgc       120
     acgggcggcc acctgtcgtc gaacctgggc acggtcgagc tgtcgctggc gctgcattat       180
     gtcttcgaca cgccgcatga ccgcatcgtc tgggacgtgg gccatcagtc gtatccgcac       240
     aagatcctga ccggccgccg cgaaggcatg gcgcacctgc gccagcaggg cggcatctcg       300
     ggttttccca agcgcagcga gtccgagtac gacgccttcg gcaccgcgca ttcgtccacc       360
     tcgatttccg cggcgctggg catggccgtg gcctcgcgca acgccggtgt gcagcgccag       420
     cacatcgccg tcatcggcga cggcgccatg tccgcgggca tggccttcga ggccatgaac       480
     aacgcggggg tcacgcccaa catcaacctg ctggtcgtgc tgaacgacaa cgacatgtcg       540
     atttcgccgc cggtgggcgc gctcaatcgc tatctggcgc ggctgatgtc cgggcagttc       600
     tacgccgcgg ccaagaatgt cgggcgggcg gtgctgcagc atgtgccgcc ggtgctggag       660
     ctggcgcgcc ggctcgaaga gcacgccaag ggcatggtga cgccggcgac gctgttcgag       720
     gagttcggat tcaactacgt cggcccgatc gacggccacg acctcgacgc cctggtgccc       780
     accctgcaga acctgcgggc gctgccgggc ttgcaattcc tgcacgtggt cacccgcaaa       840
     ggccagggct acaagctggc cgaggccgat cccgtgctct accacggccc gggcaagttc       900
     gaccccgccg tcggcatcca gcaggccaag gcgcctgccc gcaagacctt cacgcaagtg       960
     ttcggccagt ggctgtgcga catggccgag cgcgacgagc ggctggtggg catcacgccg      1020
     gccatgcgcg agggcagcgg gctggtcgag ttcgagcagc gcttcccgca acgctatttc      1080
     gacgtgggca tcgccgagca gcacgccgtg acgttcgccg ccgggctggc ctgtgagggg      1140
     caaaagcccg tggtggccat ctattccacc ttcctgcagc gcggctacga tcagctggtg      1200
     cacgacgtgg cgctgcagaa cctggatgtc accttcgcgc tggaccgcgc cggcctggtg      1260
     ggcgccgacg gcgcgaccca cgccggcaac tacgacatcg ccttcctgcg ctgcgtgccc      1320
     aacatggtgg tggccgcgcc gtcggacgag agcgaggcgc gcctgctgct gtcgacgtgc      1380
     tacgagcatc cggggcccgc ttcggtgcgc tacccgcgcg gcgcgggatg cggcgccgcg      1440
     gtcggcgaag gcctcgccac ggtgccgctg ggcaaggggc tggtccgccg cgaaggccgc      1500
     cggatcgcca tcctgggttt tggtaccctg gtgcaggcgg cgctgggcgc ggccggccag      1560
     atcgacgcca tggtggccga catgcgcttt gtcaagccgc tggaccgcga actcgtgctg      1620
     gagctggccg cgcgccacga cgcgctggtc accgtcgaag aggcggcaat catgggcggg      1680
     gcgggcagcg ccgtgctgga gacgctggcc gaggccggcg tgaccctgcc ggtgctgcag      1740
     ttggggcttc ccgacgcgtt catcgatcat ggcgaccagg ccgcgttgct ggccggcctg      1800
     gggctggacg ccgcgggcat cgagcgcgcg atccgggcgc gtttcggcgc attgctggct      1860
     tga                                                                    1863
//
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