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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE42715; SV 1; linear; genomic DNA; STD; PRO; 987 BP.
XX
PA   BX640418.1
XX
DE   Bordetella pertussis 3-oxoacyl-[acyl-carrier-protein] synthase III
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..987
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX640418.1:153047..154033)
FT                   /transl_table=11
FT                   /gene="fabH"
FT                   /locus_tag="BP2443"
FT                   /product="3-oxoacyl-[acyl-carrier-protein] synthase III"
FT                   /note="Similar to many involved in fatty acid biosynthesis
FT                   including: Neisseria meningitidis putative
FT                   3-oxoacyl-[acyl-carrier-protein] synthase III FabH or
FT                   Nma0538 TR:Q9JW56 (EMBL:AL162753) (320 aa) fasta scores:
FT                   E(): 5.9e-69, 57.45% id in 322 aa, Rhodobacter capsulatus
FT                   3-oxoacyl-[acyl-carrier-protein] synthase III FabH
FT                   SW:FABH_RHOCA (P30790) (324 aa) fasta scores: E(): 1.2e-60,
FT                   52.45% id in 326 aa and to Escherichia coli
FT                   3-oxoacyl-[acyl-carrier-protein] synthase III FabH or b1091
FT                   or z1730 or ecs1469 SW:FABH_ECOLI (P24249) (317 aa) fasta
FT                   scores: E(): 1.4e-59, 50.77% id in 321 aa"
FT                   /db_xref="GOA:Q7VW29"
FT                   /db_xref="InterPro:IPR016038"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VW29"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE42715.1"
FT                   /translation="MEKAMKYAKIAGSGGYLPERVVTNDDLAAELATRQISTSDEWIVE
FT                   RTGIRQRHLAERGVTTSQLATEAARRAMDDAGVQADEIDMIIVATSTPDYVFPSTACLV
FT                   QANLGAKGGAAFDVQAVCSGFVYAMTTADNFIRAGRARCALVIGAEVFSRILDWNDRGT
FT                   CVLFGDGAGAVVLKAADEPGILAAHLHADGSQTKILCAAGNVAYGDVTGDPFLRMDGQA
FT                   VFKQAVTVLDRSARDVCAEAGVEVDDIDWLIPHQANVRILNFLARKLRVPTERVVITMD
FT                   QHANTSAASVPLALDVARRDGRVKPGQLVLMQGVGGGFTWGSVLARM"
XX
SQ   Sequence 987 BP; 156 A; 347 C; 334 G; 150 T; 0 other; 63051057 CRC32;
     atggaaaaag ctatgaaata cgccaagatc gccggttcgg gcggctacct tcccgaacgc        60
     gtcgtcacca acgacgatct ggccgccgag ctggcgacgc ggcaaatttc cacgtccgac       120
     gagtggatcg tcgagcgcac cggcatccgg cagcgccacc tggccgagcg tggcgtgacc       180
     accagccagc tggccaccga ggcggcgcgc cgcgccatgg acgacgccgg ggtgcaggcc       240
     gacgagatcg acatgatcat cgtcgccacg tcgacgccgg actacgtctt ccccagcacg       300
     gcctgcctgg tgcaggccaa cctgggcgcc aagggcggcg cggccttcga cgtgcaggcc       360
     gtctgcagcg gcttcgtcta cgccatgacc accgccgaca acttcattcg cgccggccgc       420
     gcgcgctgcg cgctggtgat cggcgccgaa gtcttctcgc gcattctcga ctggaacgac       480
     cgcggcacct gcgtgctgtt cggcgatggc gccggcgccg tcgtgctcaa ggcggccgac       540
     gagccgggca tcctggctgc gcacctgcat gccgatggca gccagaccaa gattctctgc       600
     gccgcgggca acgtcgcgta cggggacgtc accggcgatc ccttcctgcg catggacggc       660
     caggcggtgt tcaagcaggc ggtcacggtg ctcgaccgtt cggcgcgcga cgtctgcgcc       720
     gaggctggcg tcgaggtcga tgacatcgat tggctgatcc cgcaccaggc caacgtgcgc       780
     atcctgaatt tcctggcgcg caagttgcgc gtgccgaccg aacgggtcgt catcaccatg       840
     gaccagcatg ccaacacctc ggcggccagc gtgccgctgg cgctcgatgt cgcgcgccgc       900
     gacgggcgcg tcaagccggg ccagctggta ctcatgcaag gcgtgggcgg cggcttcacc       960
     tggggctccg tgctggcccg catgtag                                           987
//
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