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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE42659; SV 1; linear; genomic DNA; STD; PRO; 858 BP.
XX
PA   BX640418.1
XX
DE   Bordetella pertussis 2-dehydro-3-deoxyphosphooctonate aldolase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..858
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX640418.1:93991..94848)
FT                   /transl_table=11
FT                   /gene="kdsA"
FT                   /locus_tag="BP2388"
FT                   /product="2-dehydro-3-deoxyphosphooctonate aldolase"
FT                   /EC_number="2.5.1.55"
FT                   /note="Similar to many eg. Escherichia coli
FT                   2-dehydro-3-deoxyphosphooctonate aldolase KdsA or b1215
FT                   SW:KDSA_ECOLI (P17579) (284 aa) fasta scores: E(): 1.6e-45,
FT                   44.87% id in 283 aa, and to Xylella fastidiosa
FT                   2-dehydro-3-deoxyphosphooctonate aldolase xf1289 TR:Q9PDU0
FT                   (EMBL:AE003962) (295 aa) fasta scores: E(): 3.1e-76, 71.27%
FT                   id in 282 aa, and to Pisum sativum
FT                   2-dehydro-3-deoxyphosphooctonate aldolase KdsA SW:KDSA_PEA
FT                   (O50044) (290 aa) fasta scores: E(): 2e-53, 54.85% id in
FT                   268 aa"
FT                   /db_xref="GOA:Q7VW77"
FT                   /db_xref="InterPro:IPR006269"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VW77"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE42659.1"
FT                   /translation="MMKACGFDIGLDHPFFLIAGPCVIESRELAFETAGRLKEITGKLG
FT                   VPFIYKSSFDKANRSSGKSFRGPGMDEGLKILADVRAQLDVPVLTDVHDIDQVAPVAAV
FT                   VDMLQTPAFLCRQTDFIRACAATLKPVNIKKGQFLAPHDMLQVARKARDAALEAGGDGN
FT                   NILVCERGASFGYNNLVSDMRSLAIMRETDCPVVFDATHSVQLPGGQGASSGGQREFVP
FT                   VLARAAVAVGVAGLFMETHPNPACAMSDGPNAVPLDRMAELLESLVALDRVTKRSGFLE
FT                   NQFV"
XX
SQ   Sequence 858 BP; 140 A; 281 C; 276 G; 161 T; 0 other; 4166094371 CRC32;
     gtgatgaaag cctgcggttt cgatatcggc ctggatcatc cctttttcct gatcgccggc        60
     ccgtgcgtca tcgagtcgcg cgagctggcc ttcgaaaccg ccggccgtct caaggagatc       120
     accggcaagc tgggcgtgcc cttcatctac aagagctcgt tcgacaaggc caaccgcagt       180
     tcgggcaagt cgtttcgcgg gccgggcatg gacgaaggcc tgaagatcct ggccgacgtg       240
     cgcgcccagc tggatgtgcc ggttctcacc gacgtccacg atatcgacca ggtcgcgccc       300
     gtggccgcgg tggtcgacat gctgcagacg ccggccttcc tgtgccggca gaccgacttc       360
     atccgcgcct gtgcggccac gctcaagccg gtgaacatca aaaagggcca gttcctggcg       420
     ccgcacgaca tgctccaggt ggcccggaag gcccgcgacg cggcgctcga agccggcggc       480
     gacggcaata acatcctggt ttgcgagcgt ggcgcttctt tcggatacaa caacttagtg       540
     tccgacatgc gttcgctcgc tatcatgcgg gaaaccgact gtcccgtcgt gttcgatgcc       600
     acgcactcgg tgcaattgcc gggcgggcag ggggcctcgt cgggcggtca gcgcgaattc       660
     gtgccggtgc tggcgcgtgc cgccgttgcg gtcggcgtgg ccgggctgtt catggaaacc       720
     catcccaatc ccgcctgcgc catgtccgac ggccccaacg ccgtgccgct ggaccgcatg       780
     gcggagttgc ttgaatcgct ggtggcgctg gaccgcgtca ccaaacgcag tggctttctc       840
     gaaaaccagt ttgtctga                                                     858
//
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