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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE42358; SV 1; linear; genomic DNA; STD; PRO; 1059 BP.
XX
PA   BX640417.1
XX
DE   Bordetella pertussis putative beta-hexosaminidase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1059
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640417.1:118002..119060
FT                   /transl_table=11
FT                   /gene="nagZ"
FT                   /locus_tag="BP2080"
FT                   /product="putative beta-hexosaminidase"
FT                   /EC_number="3.2.1.52"
FT                   /note="Similar to e.g. Escherichia coli beta-hexosaminidase
FT                   NagZ nagZ or b1107 SW:NAGZ_ECOLI (P75949) (341 aa) fasta
FT                   scores: E(): 5e-48, 47.097% id in 310 aa and Vibrio
FT                   furnissii beta-hexosaminidase nagz or exo iI SW:NAGZ_VIBFU
FT                   (P96157) (329 aa) fasta scores: E(): 4.2e-32, 45.133% id in
FT                   339 aa"
FT                   /db_xref="GOA:Q7VWV8"
FT                   /db_xref="InterPro:IPR001764"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VWV8"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE42358.1"
FT                   /translation="MSSKKKTKPVLPPGPVMVDVAGTTLTKDEKRRLRNPLVGGVILFA
FT                   RNFTDRRQLCALTRAIHKARKEPLLIAVDHEGGRVQRFRDDGFTALPPMQELGKLWDRD
FT                   PLAAMRLATEAGYVLAAELRACGVDLSFTPVLDLDYGVSKVIGNRAFHHDARVVTMLSR
FT                   ALTQGLALAGMAACGKHFPGHGFVGADSHHEIPVDPRPLARILKDDAAPYAWLGDLVMP
FT                   AVMPAHVIYPKVDAQPAGFSRRWVSEILRERLGYDGVVFSDDLTMEGASVAGDILARAE
FT                   AALGAGCDMVLVCRPDLADELLDRLQVQHPAASVERIRRLLPRFAAPDWDTLQNDSRYQ
FT                   HARRLQSQIVSG"
XX
SQ   Sequence 1059 BP; 155 A; 355 C; 369 G; 180 T; 0 other; 948523506 CRC32;
     atgtccagca agaagaaaac caagcccgtc ctgcctcccg gtcccgtcat ggtggatgtg        60
     gccggcacga cgctgaccaa ggacgagaag cgccgcctgc gcaaccccct ggtgggcggg       120
     gtgatcctgt tcgcgcgcaa tttcaccgat cgccggcaat tgtgcgcgct gacgcgggcc       180
     atccacaagg cgcgcaagga gccgctgctg atcgcggtgg accacgaggg cggccgcgtg       240
     cagcgctttc gcgacgatgg ctttaccgcg ttgccgccca tgcaggaact gggcaagctg       300
     tgggaccgcg atccgctggc ggcgatgcgg ctggcgaccg aggccggcta cgtgctggcc       360
     gccgagctgc gcgcctgcgg cgtcgatctc agcttcacgc cggtattgga cctcgactac       420
     ggcgtgagca aggtgatcgg caatcgcgcc ttccaccatg acgcacgcgt ggtcaccatg       480
     ctgtcgcgcg cgctgacgca gggcctggcg ctggcgggca tggcggcctg cggcaagcat       540
     ttccccggcc atgggttcgt gggcgccgat tcgcaccacg agatcccggt cgatccgcgg       600
     ccgctcgcgc gcatcctgaa ggatgacgcg gcgccttacg cctggctggg cgacctggtc       660
     atgccggctg tcatgccggc gcatgtgatc tatccgaagg tcgatgccca gcccgcgggt       720
     ttttcgcgcc gctgggtcag cgagatcctg cgtgaacggc tgggctacga tggcgtggtg       780
     ttctccgacg atctgaccat ggagggcgcg tcggtggcgg gcgacatcct ggcccgcgcc       840
     gaggcggccc tgggcgccgg ctgcgacatg gtgctggtat gccgcccgga cctggccgac       900
     gagctgctgg accgcctgca ggtccagcat ccggccgcct cggtcgagcg catccgccgg       960
     ctgttgccgc ggttcgccgc gccggactgg gacactttgc agaatgacag ccgctatcag      1020
     catgcccgac gacttcaatc tcaaatcgtt tctggctga                             1059
//
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