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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE41877; SV 1; linear; genomic DNA; STD; PRO; 741 BP.
XX
PA   BX640415.1
XX
DE   Bordetella pertussis ribonuclease PH
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..741
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640415.1:278254..278994
FT                   /transl_table=11
FT                   /gene="rph"
FT                   /locus_tag="BP1588"
FT                   /product="ribonuclease PH"
FT                   /EC_number="2.7.7.56"
FT                   /note="Similar to Escherichia coli ribonuclease PH Rph or
FT                   B3643 SW:RNPH_ECOLI (P03842) (238 aa) fasta scores: E():
FT                   9.5e-53, 62.55% id in 235 aa, and to Xylella fastidiosa
FT                   ribonuclease PH Xf1505 TR:Q9PD74 (EMBL:AE003980) (241 aa)
FT                   fasta scores: E(): 4.1e-56, 66.66% id in 237 aa"
FT                   /db_xref="GOA:Q7VXY3"
FT                   /db_xref="HSSP:1R6L"
FT                   /db_xref="InterPro:IPR002381"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VXY3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE41877.1"
FT                   /translation="MSTSAADTLSRPSGRAVDALRPFSLERGFTRYAEGSVLVRAGNTH
FT                   VLCTASVLEKVPPFLKGRGEGWVTAEYGMLPRATHTRGDREAARGKQSGRTQEIQRLIG
FT                   RSLRAVFDLRLLGERTLHLDCDVLQADGGTRCASITGAWVAAADAVALLMQRGDLAHNP
FT                   IRDAVAAVSVGLVDGRAVLDLDYQEDSACAADVNVVMTGSGAFVEVQGTGEGATFTRGE
FT                   LDTMLGLAEGGIAQLVRAQREALQ"
XX
SQ   Sequence 741 BP; 107 A; 253 C; 275 G; 106 T; 0 other; 1394310509 CRC32;
     gtgagcactt ccgccgccga tactctttcc cgtccgtccg gccgcgccgt cgacgccttg        60
     cggccgttca gcctggagcg cggcttcacg cgttatgccg aaggctcggt gctggtgcgc       120
     gcgggcaata cgcatgtgct gtgcacggcc agcgtgctcg agaaggtgcc gccgtttctg       180
     aagggacgcg gcgaaggctg ggtgaccgcc gagtacggca tgctgccgcg cgccacgcat       240
     acgcgcggcg accgcgaggc cgcgcgcggc aagcaaagcg gccgcaccca ggaaatccag       300
     cgcctgatcg gccgcagcct gcgcgcggtg ttcgacctgc gcctgctggg cgaacgcacc       360
     ctgcacctgg attgcgacgt gctgcaggcc gacggcggta cgcgttgcgc cagcatcacg       420
     ggcgcctggg tggccgccgc cgacgccgtg gcgctgctga tgcagcgcgg cgacctggcg       480
     cacaacccga tccgcgacgc ggtcgccgcc gtgtcggtcg gcctggtgga tggacgcgcg       540
     gtgctggacc tggattacca ggaagattcg gcctgcgcgg ccgacgtcaa tgtggtgatg       600
     accggcagcg gcgcattcgt cgaagtgcag ggcaccggcg agggcgccac cttcacgcgc       660
     ggcgaactcg acacgatgct ggggctggcc gaaggcggca tcgcccagct cgtgcgggcg       720
     cagcgcgagg cactgcagta a                                                 741
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