spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE41722; SV 1; linear; genomic DNA; STD; PRO; 1182 BP.
XX
PA   BX640415.1
XX
DE   Bordetella pertussis lipid-A-disaccharide synthase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1182
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640415.1:120685..121866
FT                   /transl_table=11
FT                   /gene="lpxB"
FT                   /gene_synonym="pgsB"
FT                   /locus_tag="BP1432"
FT                   /product="lipid-A-disaccharide synthase"
FT                   /EC_number="2.4.1.182"
FT                   /note="Similar to Escherichia coli lipid-A-disaccharide
FT                   synthase LpxB or PgsB or B0182 SW:LPXB_ECOLI (P10441) (382
FT                   aa) fasta scores: E(): 3.4e-46, 40.76% id in 390 aa, and to
FT                   Pseudomonas aeruginosa lipid-A-disaccharide synthase LpxB
FT                   or Pa3643 SW:LPXB_PSEAE (Q9HXY8) (378 aa) fasta scores:
FT                   E(): 1.3e-52, 45.75% id in 389 aa"
FT                   /db_xref="GOA:Q7VYB7"
FT                   /db_xref="InterPro:IPR003835"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VYB7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE41722.1"
FT                   /translation="MSLRIGMVAGEPSGDLLAGRIIAGLQARAPGVHCAGIGGPQMAAR
FT                   GFEAWHPMHALTVFGYIDAFKRIPSLLSTYGDVKRRLLAEPPSVFVGIDAPDFNLRLEH
FT                   QLRQAGTPTVHFVGPSIWAWRYERINKIRAAVSHMLVLFPFEEALYRKEGIPVTYVGHP
FT                   LAGVIPMQPDRAAARARLGIDADARVLAILPGSRSSEIRLLAPRFLQAAAELVRRDPRL
FT                   QCVVPMVNPQRRAEFEAIATQHPVPGLRCVTAAEGQGETPVAWSVMEASNAVLVASGTA
FT                   TLETALYKRPMVISYVLSPWMRRIMAWKSGQQRPYLPWVGLPNVLLRDFAVPELLQDEA
FT                   TPAALAEATWQALTDEAGAARIEARFTALHQDLLRDTPALAAQAILEVADGAA"
XX
SQ   Sequence 1182 BP; 158 A; 417 C; 418 G; 189 T; 0 other; 1754597993 CRC32;
     atgagcctgc gcataggcat ggtcgccggc gagccttcgg gcgacctgct ggccgggcgc        60
     atcatcgccg gcctgcaggc ccgggcaccc ggcgtgcact gcgccggcat aggcgggccc       120
     cagatggcgg cgcgcggctt cgaggcctgg caccccatgc atgcgctcac ggtgttcggc       180
     tacatcgatg cgttcaagcg gattcccagc ctgctgtcga cctacggcga cgtcaagcgg       240
     cgcctgctgg ccgagccgcc gtcggtgttc gtgggcatcg acgcgccgga tttcaacctg       300
     cgcctggagc accagttgcg ccaggccggt acccccaccg tgcatttcgt cggtccctcg       360
     atctgggcct ggcgctacga acgcatcaac aagatccgcg ccgccgtctc ccacatgctg       420
     gtgctgtttc cgttcgagga agcgctctat cgcaaggaag gaatcccggt cacctatgtc       480
     ggccatccgc tggccggggt gattcccatg cagcccgatc gcgccgcggc ccgcgcgcgg       540
     ctgggcatcg acgccgacgc gcgggtgctg gccatcctgc cgggcagccg ctcgtccgag       600
     atccgcctgc ttgcgccgcg tttcctgcag gccgcggccg agctggtccg gcgcgatcca       660
     cgcctgcagt gcgtggtgcc catggtcaac ccgcagcggc gcgccgagtt cgaggctatc       720
     gcgacccagc atccggtgcc gggcctgcgt tgcgtgaccg ccgccgaggg gcagggcgag       780
     acgccggtgg cctggtccgt catggaggcg agcaacgccg tcctggtggc cagcggcacg       840
     gccacgctgg aaacggcgct gtacaagcgg cccatggtca tttcgtacgt gctgtcgccg       900
     tggatgcggc gcatcatggc ctggaaatcc gggcagcaac gtccctacct gccgtgggtg       960
     gggctgccca atgtgctgct gcgcgatttc gccgtgccgg agctgctgca ggacgaggcc      1020
     acgccggccg cgctggccga ggcgacctgg caggcgctga ccgacgaggc cggcgcggcg      1080
     cgcatcgagg cgcgctttac cgccttgcac caggacttgc tgcgcgatac gccggcgctg      1140
     gccgcccagg cgattctgga ggtggccgat ggagcagcct ga                         1182
//
spacer
spacer