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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE41715; SV 1; linear; genomic DNA; STD; PRO; 1200 BP.
XX
PA   BX640415.1
XX
DE   Bordetella pertussis 1-deoxy-D-xylulose 5-phosphate reductoisomerase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1200
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640415.1:112615..113814
FT                   /transl_table=11
FT                   /gene="dxr"
FT                   /locus_tag="BP1425"
FT                   /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase"
FT                   /EC_number="1.1.1.-"
FT                   /note="Similar to Escherichia coli 1-deoxy-D-xylulose
FT                   5-phosphate reductoisomerase Dxr or B0173 SW:DXR_ECOLI
FT                   (P45568) (398 aa) fasta scores: E(): 1.4e-64, 51.4% id in
FT                   391 aa, and to Pseudomonas aeruginosa 1-deoxy-D-xylulose
FT                   5-phosphate reductoisomerase Dxr or Pa3650 SW:DXR_PSEAE
FT                   (Q9KGU6) (396 aa) fasta scores: E(): 3e-77, 59.24% id in
FT                   395 aa"
FT                   /db_xref="GOA:Q7VYC4"
FT                   /db_xref="InterPro:IPR013512"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7VYC4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE41715.1"
FT                   /translation="MTRFQRVAVLGSTGSIGDSTLDVIARHPDRLGVYALSAYSRMDKL
FT                   AAQAAACGAAVVVVPDDAAAARFRAAWRGKAAMPEVRVGPRALAETAAAPECTTVMAAI
FT                   VGAAGLPAALAAAQAGKRVLLANKEALVAAGSLFMAAVRENGAELLPIDSEHNAIFQCM
FT                   PQGARAAAPTAPAPGVRRLLLTASGGPFRRQDPADLHEVTPAQACAHPNWSMGRKISVD
FT                   SATMLNKGLEVIEAHWLFAMPSERIDVLIHPQSVVHSMVEYDDGSVLAQLGQPDMRTPI
FT                   AYGLGFPERLASGVGLLDLTRWGRLDFEQPDLQRFPCLALSFAALRAGQPACVALNAAN
FT                   EVAVAAFLEGRLRYTWIARVIEAVLEWQAKQASVTLTSLDDVLDLDARARSFAGNLGLA
FT                   "
XX
SQ   Sequence 1200 BP; 160 A; 430 C; 429 G; 181 T; 0 other; 3382923558 CRC32;
     ttgacccgtt ttcaacgcgt cgccgtcctg ggatcgaccg gatcgatcgg cgacagtacg        60
     ctcgacgtta tcgcgcgcca cccggatcgg ctgggcgtgt atgccctgtc ggcctatagc       120
     cgcatggaca agctggccgc ccaggcggcc gcctgcggcg ccgccgtggt ggtcgtgccc       180
     gacgatgcgg cggctgcgcg ctttcgcgcc gcctggcgcg gcaaggccgc catgcccgag       240
     gtgcgggtcg ggccgcgcgc gctggccgag acggccgccg cgcccgagtg caccacggtc       300
     atggccgcca tcgtcggcgc cgccggcctg ccggcggccc tggccgcggc gcaggccggc       360
     aagcgggtgc tgctggccaa caaggaagcg ctggtggcgg ccggatcgct gttcatggcg       420
     gccgtgcgcg agaacggcgc cgaattgctg cccatcgaca gcgaacacaa cgccatcttc       480
     cagtgcatgc cgcagggcgc ccgggcggcc gcgcccaccg cgcccgcgcc cggcgtgcgg       540
     cgcctgctgc tgaccgcctc cggcggcccg ttccggcgcc aggacccggc cgacctgcac       600
     gaagtgacgc cggcccaggc ctgcgcacat cccaactgga gcatggggcg caagatttcg       660
     gtcgattcgg ccaccatgct gaacaaggga ctggaggtca tcgaggccca ttggctgttc       720
     gccatgccgt ccgaacgcat cgacgtgctg atccatccgc aaagcgtcgt ccattccatg       780
     gtcgagtacg acgacggctc ggtgctggcg caactgggac agcccgacat gcgcacgccc       840
     atcgcctacg ggctgggctt tccggagcgc ctggccagcg gggtggggct gctggacctg       900
     acgcgctggg gacggctgga tttcgagcag cccgacctgc agcgcttccc gtgcctggcg       960
     ctgtcgttcg ccgcgctgcg cgccggtcag ccggcctgcg tggccctgaa cgcggccaac      1020
     gaagtcgcgg tggcggcgtt cctggaaggg cgcctgcgct atacctggat cgcccgggtc      1080
     atcgaggcgg tgctcgagtg gcaggccaag caggcatctg ttaccctgac cagcctggat      1140
     gacgtgctcg acctggatgc gcgcgcgcgc tcattcgccg gcaatctcgg cctggcgtga      1200
//
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