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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE41672; SV 1; linear; genomic DNA; STD; PRO; 1023 BP.
XX
PA   BX640415.1
XX
DE   Bordetella pertussis peptidoglycan hydrolase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1023
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640415.1:69190..70212
FT                   /transl_table=11
FT                   /gene="flgJ"
FT                   /gene_synonym="flaZ"
FT                   /gene_synonym="fla FX"
FT                   /locus_tag="BP1381"
FT                   /product="peptidoglycan hydrolase"
FT                   /EC_number="3.2.1.-"
FT                   /note="Similar to Salmonella typhimurium peptidoglycan
FT                   hydrolase FlgJ or FlaZ or Fla FX SW:FLGJ_SALTY (P15931)
FT                   (316 aa) fasta scores: E(): 3.9e-22, 42.58% id in 317 aa,
FT                   and to Escherichia coli peptidoglycan hydrolase FlgJ or
FT                   FlaZ or Fla FX or B1081 SW:FLGJ_ECOLI (P75942) (313 aa)
FT                   fasta scores: E(): 3.9e-22, 40.56% id in 318 aa"
FT                   /db_xref="GOA:Q7VYG1"
FT                   /db_xref="InterPro:IPR019301"
FT                   /db_xref="UniProtKB/TrEMBL:Q7VYG1"
FT                   /protein_id="CAE41672.1"
FT                   /translation="MSFVSYTSRPGVQESVFDLGRLADLKRDAVKAPDGQRQQTEVARQ
FT                   FEALFLQMMLKRMREATPKEGLFDSQQTEMLQGMADEQLALQLASPDIGLAQALLGQMQ
FT                   QGQPPVPAAAAAGGDAAAARALAGTAAPAPLVRDLRGNYVQPDPAPRREVNALLDVLRS
FT                   NRARDRAMAAAEGAPSHVVDFVSRMSRAANVAAQQSGVPARLILGQAALESGWGRRELR
FT                   HEDGSTSYNLFGIKAGASWKGKVVNVMTTEYVDGVAQKLVQSFRAYSSYEESFSDYARL
FT                   IGNSPRYEAAVTQAGNEIEAARRIQEAGYATDPRYAEKLISIMGQLRTSVARADFSGGL
FT                   "
XX
SQ   Sequence 1023 BP; 163 A; 353 C; 372 G; 135 T; 0 other; 1842146996 CRC32;
     atgtcattcg tcagctatac ctcccgcccg ggcgtccagg aatcggtctt cgacctgggc        60
     cgcctggccg acctcaagcg cgacgcggtc aaggcgccgg acggccagcg ccagcaaacg       120
     gaagtggccc ggcagttcga ggcgctgttc ctgcagatga tgctcaagcg catgcgcgag       180
     gcgacgccca aggagggcct gttcgattcg cagcagaccg agatgctgca gggcatggcc       240
     gacgagcagc tggccctgca gctggcctcg ccggacatcg gcctggcgca ggcgctgctg       300
     gggcagatgc agcagggcca gccgccggtc ccggccgccg cggcagccgg cggcgacgcc       360
     gcggcggccc gcgcgctggc cggcaccgcc gcgcccgcgc cgctggtgcg cgacctgcgc       420
     ggcaactatg tacagccgga ccccgcgccc aggcgcgagg tcaacgcgct gctggacgtg       480
     ttgcgcagca accgggcgcg cgaccgcgcc atggcggcgg ccgagggcgc gccctcgcac       540
     gtggtcgatt tcgtgtcgcg catgtcgcgc gcggccaatg tcgcggcgca gcaaagcggc       600
     gtgccggcgc gcctgatcct gggccaggcg gcgctggaat cgggttgggg ccggcgcgag       660
     ctgcgccacg aggacggcag caccagttac aacctgttcg gcatcaaggc gggcgccagc       720
     tggaagggca aggtcgtcaa tgtgatgacg accgagtacg tcgacggcgt cgcgcagaag       780
     ctggtgcagt cgttcagggc ctattcgtcc tacgaagagt cgttcagcga ctatgcccgc       840
     ctgatcggca acagcccgcg ctacgaggcg gcggttaccc aggccggcaa cgagatcgag       900
     gcggcgcggc gcatccagga ggccggctac gccaccgatc cgcgctatgc cgaaaagctg       960
     atcagcatca tgggccagct gcgcaccagc gtggcgcgcg ccgatttttc cggcggcctc      1020
     taa                                                                    1023
//
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