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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE40628; SV 1; linear; genomic DNA; STD; PRO; 1392 BP.
XX
PA   BX640411.1
XX
DE   Bordetella pertussis fumarate hydratase class II
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1392
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640411.1:256543..257934
FT                   /transl_table=11
FT                   /gene="fumC"
FT                   /locus_tag="BP0248"
FT                   /product="fumarate hydratase class II"
FT                   /EC_number="4.2.1.2"
FT                   /note="Similar to Escherichia coli fumarate hydratase class
FT                   II FumC or B1611 SW:FUMC_ECOLI (P05042) (467 aa) fasta
FT                   scores: E(): 4.8e-121, 71.522% id in 460 aa, and to
FT                   Myxococcus xanthus fumarate hydratase Fhy TR:P95331
FT                   (EMBL:AF013216) (466 aa) fasta scores: E(): 1e-119, 70.370%
FT                   id in 459 aa"
FT                   /db_xref="GOA:Q7W0A2"
FT                   /db_xref="InterPro:IPR000362"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W0A2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE40628.1"
FT                   /translation="MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVA
FT                   AMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMN
FT                   MNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPAL
FT                   KALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLH
FT                   QLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALK
FT                   TLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVM
FT                   GNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITE
FT                   LVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDM
FT                   TNARR"
XX
SQ   Sequence 1392 BP; 255 A; 473 C; 472 G; 192 T; 0 other; 864522967 CRC32;
     atgaaaaccc gcaccgaaaa agacactttc ggcccgatcg aggtgcccga gcagcacctg        60
     tggggcgcgc agacccagcg ctcgctgcat ttcttcgcga tctcgaccga gaagatgccg       120
     gtgccgctgg tcgccgccat ggcacgcctg aagcgcgccg ccgccaaggt caacgccgag       180
     ctgggcgagc tggatccgca ggtcgcagac gccatcatgc gggccgccga tgaggtgatc       240
     gccggcaagt ggcccgacga gtttccgctg tcggtctggc agaccggctc gggcacgcag       300
     agcaacatga acatgaacga ggtgctggcc aaccgcgcct ccgagctgct gggcggcgag       360
     cgcggcgaag gccgcaaggt gcaccccaac gaccacgtga accggggcca gtcgtccaac       420
     gatacctttc cgaccgccat gcacgtggcc gccgcggtcg aggtcgagca ccgcgtgctg       480
     cccgccctga aggcgttgcg cggcacgctg gccgccaaga gcgcggcgtt ctacgacatc       540
     gtcaagatcg gtcgcaccca tttgcaggac gccaccccgt tgacgctggg ccaggagatc       600
     tccggctacg tggcgcagct ggacctggcc gagcagcaga tccgcgcgac gctggccggc       660
     ctgcaccagc tggccatcgg cggcacggcg gtgggcaccg gcctgaacgc gcatccgcag       720
     ttcagcgcca aggtatcggc cgaactggcc catgacacgg gcagcgcgtt cgtgtcggcg       780
     cccaacaagt tccaggcgct ggcttcgcac gaggcgctgc tgttcgcgca cggcgccttg       840
     aagacgctgg ccgccggcct gatgaagatc gccaacgatg tgcgctggct ggccagcggc       900
     ccgcgctcgg ggctgggcga aatcagcatt cccgagaacg agccgggcag ctccatcatg       960
     ccgggcaagg tcaacccgac ccagtgcgaa gccgtcacga tgctggccgc gcaggtcatg      1020
     ggcaacgacg tggccatcaa tgtcggcggg gccagcggca acttcgagct gaacgtcttc      1080
     aagccgctgg tgatccacaa tttcctgcag tcggtgcgcc tgctggccga cggcatggtc      1140
     agcttcgaca agcactgcgc ggccggcatc gagcccaacc gcgagcgcat caccgagctg      1200
     gtcgagcgtt cgctgatgct ggtgactgcg ctcaacccgc acatcggcta cgacaaggcc      1260
     gcgcagatcg ccaagaaggc gcacaaggaa aacctgtcgc tgaaagaggc ggcgctggcg      1320
     ctggggcacc tgaccgaggc gcagttcgcc gagtgggtgg tgccgggcga catgaccaac      1380
     gcgcgccgct ag                                                          1392
//
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