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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAE40564; SV 1; linear; genomic DNA; STD; PRO; 564 BP.
XX
PA   BX640411.1
XX
DE   Bordetella pertussis deoxycytidine triphosphate deaminase
XX
OS   Bordetella pertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
OX   NCBI_TaxID=520;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..564
FT                   /organism="Bordetella pertussis"
FT                   /strain="Tohama I"
FT                   /mol_type="genomic DNA"
FT   CDS             BX640411.1:188085..188648
FT                   /transl_table=11
FT                   /gene="dcd"
FT                   /gene_synonym="dus"
FT                   /gene_synonym="paxA"
FT                   /locus_tag="BP0185"
FT                   /product="deoxycytidine triphosphate deaminase"
FT                   /EC_number="3.5.4.13"
FT                   /note="Similar to Escherichia coli deoxycytidine
FT                   triphosphate deaminase Dcd or Dus or PaxA or B2065
FT                   SW:DCD_ECOLI (P28248) (193 aa) fasta scores: E(): 8.4e-05,
FT                   27.389% id in 157 aa, and to Xylella fastidiosa
FT                   deoxycytidine triphosphate deaminase Xf0762 TR:Q9PFB6
FT                   (EMBL:AE003917) (191 aa) fasta scores: E(): 1.4e-64,
FT                   81.675% id in 191 aa"
FT                   /db_xref="GOA:Q7W0F2"
FT                   /db_xref="InterPro:IPR011962"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W0F2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAE40564.1"
FT                   /translation="MSIKSDRWIRRAAEAGMIEPFEPGQVRTAGGNRIVSYGTSSYGYD
FT                   VRCADEFKIFTNINSTIVDPKQFDEKSFVDFKGDVCIIPPNSFALARTVEYFRIPRSVL
FT                   TICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKVYAGEGCAQMLFLESDE
FT                   VCETSYRDRGGKYQGQRGVTLPRT"
XX
SQ   Sequence 564 BP; 112 A; 200 C; 166 G; 86 T; 0 other; 41515861 CRC32;
     atgagcatca aaagcgaccg ctggatccgc cgcgcggccg aagccggcat gatcgaaccc        60
     ttcgagccgg gccaggtccg caccgcgggc ggcaaccgca tcgtcagcta cggcaccagc       120
     agctacggct acgacgtgcg ctgcgcggac gaattcaaga tcttcaccaa catcaattcc       180
     accatcgtcg atcccaagca gttcgacgag aagtcgttcg tcgacttcaa gggcgatgtc       240
     tgcatcatcc cgcccaactc gttcgcgctg gcgcgcacgg tcgagtactt ccgcatcccg       300
     cgcagcgtgc tgacgatctg cctgggcaag agcacctacg cgcgttgcgg catcatcgtc       360
     aacgtcacgc cgctcgaacc cgaatgggaa ggccacgtca cgctggagtt ctccaacacc       420
     acgccgctgc cggccaaggt ctacgccggc gagggctgcg cccagatgct gttcctcgaa       480
     agcgacgagg tgtgcgagac ctcgtatcgc gaccgcggcg gcaagtacca gggccagcgc       540
     ggcgtcaccc tgccgcgcac ctga                                              564
//
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