EBI Dbfetch

ID   CAD97273; SV 1; linear; genomic DNA; STD; PRO; 1692 BP.
XX
PA   BX248342.1
XX
DE   Mycobacterium bovis AF2122/97 PROBABLE FERREDOXIN-DEPENDANT NITRITE
DE   REDUCTASE NIRA
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1692
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             BX248342.1:141750..143441
FT                   /transl_table=11
FT                   /gene="nirA"
FT                   /locus_tag="Mb2412"
FT                   /product="PROBABLE FERREDOXIN-DEPENDANT NITRITE REDUCTASE
FT                   NIRA"
FT                   /EC_number="1.7.7.1"
FT                   /note="Mb2412, nirA, len: 563 aa. Equivalent to Rv2391,
FT                   len: 563 aa, from Mycobacterium tuberculosis strain H37Rv,
FT                   (100.0% identity in 563 aa overlap). Probable nirA,
FT                   ferredoxin-dependant nitrite reductase (EC 1.7.7.1),
FT                   similar to many nitrate reductases e.g.
FT                   CAC33947|SCBAC1A6.26c Putative nitrite/sulphite reductase
FT                   from Streptomyces coelicolor (565 aa), FASTA scores: opt:
FT                   2335, E(): 1.2e-137, (60.1% identity in 567 aa overlap);
FT                   Q9RZD6|DRA0013 FERREDOXIN-NITRITE REDUCTASE from
FT                   Deinococcus radiodurans (563 aa), FASTA scores: opt: 1141,
FT                   E(): 2.2e-63, (39.6% identity in 533 aa overlap);
FT                   Q59656|NIRA (D31732|PEENIRNRT_1) ferredoxin-dependant*
FT                   NITRITE REDUCTASE (*: see citation below) from Plectonema
FT                   boryanum (654 aa), FASTA scores: opt: 805, E(): 1.9e-42,
FT                   (31.7% identity in 517 aa overlap); Q55366|NIRA|SLR0898
FT                   FERREDOXIN-NITRITE REDUCTASE from Synechocystis sp. strain
FT                   PCC 6803 (502 aa), FASTA scores: opt: 799, E(): 3.7e-42,
FT                   (32.3% identity in 517 aa overlap). Highly similar (only in
FT                   N-terminal part because shortened protein (fragment) owing
FT                   to an IS900 insertion) to Q9K541|NIRA NITRATE REDUCTASE
FT                   (FRAGMENT) from Mycobacterium paratuberculosis (198 aa),
FT                   FASTA scores: opt: 798, E(): 2.1e-42, (65.4% identity in
FT                   182 aa overlap)."
FT                   /db_xref="GOA:Q7TYP6"
FT                   /db_xref="InterPro:IPR005117"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7TYP6"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAD97273.1"
FT                   /translation="MSAKENPQMTTARPAKARNEGQWALGHREPLNANEELKKAGNPLD
FT                   VRERIENIYAKQGFDSIDKTDLRGRFRWWGLYTQREQGYDGTWTGDDNIDKLEAKYFMM
FT                   RVRCDGGALSAAALRTLGQISTEFARDTADISDRQNVQYHWIEVENVPEIWRRLDDVGL
FT                   QTTEACGDCPRVVLGSPLAGESLDEVLDPTWAIEEIVRRYIGKPDFADLPRKYKTAISG
FT                   LQDVAHEINDVAFIGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLGEVPEVWAAV
FT                   TSVFRDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLIDGPAPEPVKHPIDHV
FT                   GVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQKLVILDIPDALL
FT                   DDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINS
FT                   QLDVPITVNINGCPNSCARIQIADIGFKGQMIDDGHGGSVEGFQVHLGGHLGLDAGFGR
FT                   KLRQHKVTSDELGDYIDRVVRNFVKHRSEGERFAQWVIRAEEDDLR"
XX
SQ   Sequence 1692 BP; 341 A; 540 C; 543 G; 268 T; 0 other; 4130342861 CRC32;
     atgtccgcga aggagaaccc ccaaatgacc actgcacgtc ccgccaaggc tcgaaatgag        60
     ggccagtggg cgctgggaca tcgcgagcca ctcaacgcca acgaagagct gaagaaggcc       120
     ggcaacccgc tcgacgtgcg ggagcgcatc gaaaacatct acgccaaaca gggtttcgac       180
     agcatcgaca agaccgacct gcgagggcgc tttcgctggt ggggcctgta cacccagcgt       240
     gagcagggct acgacggcac ctggaccggt gacgacaaca tcgacaagct cgaggccaaa       300
     tacttcatga tgcgggtgcg ttgcgacggc ggcgcgctct cggctgccgc gctgcgcacg       360
     ctgggccaga tctcgacgga gttcgcgcgc gataccgccg atatctccga ccggcagaac       420
     gtgcaatacc actggatcga agtggaaaac gtccctgaaa tctggcgacg gttagacgat       480
     gtcggactgc agaccaccga ggcgtgcggt gactgcccgc gggtagtgct gggctcgccg       540
     ttggccggcg agtcgctcga cgaagtgctc gacccgacct gggcgatcga ggagatcgtg       600
     cgtcgctaca tcggcaagcc cgacttcgcc gacttgccgc gcaagtacaa gaccgccatc       660
     tctggcctgc aggacgtcgc gcacgagatc aacgacgtcg ccttcatcgg cgtcaaccat       720
     cccgagcacg gaccaggcct ggatctgtgg gtgggcggtg gactgtcgac caacccgatg       780
     ctggcccagc gggtcggcgc ctgggttcca ctgggcgaag tgcccgaggt gtgggcggcg       840
     gtcacctcgg tgtttcgcga ctacggctac cggcgactgc gcgccaaggc ccggctgaaa       900
     tttctgatca aagactgggg catagcgaag ttccgcgaag tgctcgaaac cgagtacctc       960
     aagcgtccgc tgatcgacgg tccggccccc gaaccggtca agcatccgat cgaccacgtc      1020
     ggggtgcaac gactcaagaa cgggctcaac gccgtcggag tcgcccccat cgccgggcgg      1080
     gtatcgggca ccatcctcac ggcggtcgcc gacctgatgg cgcgggccgg ttccgaccgg      1140
     atccggttca ccccctacca gaagctggtc atcctcgaca ttccggacgc cttgctcgac      1200
     gacttgatcg ccggtctgga cgcgctgggg ctgcagtcgc gcccgtcgca ttggcgccgg      1260
     aacttgatgg cgtgcagcgg gattgagttc tgcaagttgt cattcgccga aacccgggtt      1320
     cgagcacagc atttggtgcc cgagctggaa cgccggcttg aggacatcaa ctcgcagctc      1380
     gacgtaccga tcaccgtcaa catcaacggc tgcccgaact catgtgcgcg aattcaaatc      1440
     gccgacatcg gattcaaggg acagatgatc gacgacggac acggcggctc cgtcgaaggc      1500
     ttccaggtgc atctgggcgg acacctcggc ctggatgccg gattcggccg caaactgcgc      1560
     cagcacaagg tcaccagtga cgaactcggc gactacatcg accgggtggt gcgcaacttc      1620
     gtcaaacacc gcagcgaagg tgaacgcttc gcgcagtggg tcatccgggc cgaggaggac      1680
     gacctgcgat ga                                                          1692
//