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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD96573; SV 1; linear; genomic DNA; STD; PRO; 858 BP.
XX
PA   BX248344.1
XX
DE   Mycobacterium bovis AF2122/97 PROBABLE METHIONINE AMINOPEPTIDASE MAPB (MAP)
DE   (PEPTIDASE M)
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..858
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX248344.1:4676..5533)
FT                   /transl_table=11
FT                   /gene="mapB"
FT                   /locus_tag="Mb2886c"
FT                   /product="PROBABLE METHIONINE AMINOPEPTIDASE MAPB (MAP)
FT                   (PEPTIDASE M)"
FT                   /EC_number="3.4.11.18"
FT                   /note="Mb2886c, mapB, len: 285 aa. Equivalent to Rv2861c,
FT                   len: 285 aa, from Mycobacterium tuberculosis strain H37Rv,
FT                   (100.0% identity in 285 aa overlap). Probable mapB
FT                   (alternate gene name: map), methionine aminopeptidase (EC
FT                   3.4.11.18), equivalent to Q9CBU7|MAPB|ML1576 METHIONINE
FT                   AMINOPEPTIDASE from Mycobacterium leprae (285 aa), FASTA
FT                   scores: opt: 1729, E(): 1e-99, (89.75% identity in 283 aa
FT                   overlap). Also highly similar to many e.g. Q9RKR2|MAP3 from
FT                   Streptomyces coelicolor (285 aa), FASTA scores: opt: 1385,
FT                   E(): 2e-78, (70.65% identity in 283 aa overlap);
FT                   Q9SW64|C7A10.320|AT4G37040 from Arabidopsis thaliana
FT                   (Mouse-ear cress) (305 aa), FASTA scores: opt: 914, E():
FT                   3e-49, (50.35% identity in 286 aa overlap);
FT                   P07906|AMPM_ECOLI|MAP|B0168|Z0178|ECS0170 from Escherichia
FT                   coli strains K12 and O157:H7 (264 aa), FASTA scores: opt:
FT                   793, E(): 8.5e-42, (51.0% identity in 245 aa overlap); etc.
FT                   BELONGS TO PEPTIDASE FAMILY M24A; ALSO KNOWN AS THE MAP
FT                   FAMILY 1. COFACTOR: COBALT; BINDS 2 IONS PER SUBUNIT. Note
FT                   that this gene has an N-terminal extension present in the
FT                   human map, but not in the prokaryotic map's. An alternative
FT                   start, with RBS, will give a protein equivalent to the
FT                   shorter prokaryotic map's."
FT                   /db_xref="GOA:P0A5J3"
FT                   /db_xref="HSSP:1C24"
FT                   /db_xref="InterPro:IPR002467"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A5J3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD96573.1"
FT                   /translation="MPSRTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPE
FT                   VIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSC
FT                   CTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRT
FT                   REATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQ
FT                   PAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEI
FT                   LTCL"
XX
SQ   Sequence 858 BP; 172 A; 278 C; 265 G; 143 T; 0 other; 881211521 CRC32;
     atgcctagtc gtaccgcgct ctcccccggc gtgctgtccc cgacacggcc ggtgcccaac        60
     tggatcgcgc gccccgaata cgtcggcaaa ccggccgccc aagagggcag cgagccgtgg       120
     gtgcagacac ctgaggtcat cgagaagatg cgcgtggcag gccggatcgc cgcaggtgcg       180
     ttggccgagg cgggcaaggc ggtcgcgccc ggggtaacca ccgacgaact cgaccggatc       240
     gcgcacgaat acctggtcga caacggcgcc tacccatcaa cgctgggcta caagggattc       300
     ccgaagtcgt gctgcacgtc cctcaacgag gtcatctgcc atggaatccc cgactcgacg       360
     gtgatcaccg acggcgacat cgtcaacatc gacgtcaccg cctacatcgg tggggtgcac       420
     ggtgacacca acgcgacgtt tccggccggc gatgtcgcag acgaacaccg gttgctcgtt       480
     gaccggaccc gcgaagcgac catgcgtgcg atcaacaccg tcaagcccgg gcgggcgttg       540
     tccgttatcg gtcgtgtcat cgagtcgtat gcaaatcggt tcgggtacaa cgtggttcga       600
     gacttcactg gtcatggcat cggcacgacg ttccacaacg ggctggtcgt cttgcactac       660
     gaccagcccg ctgtcgagac catcatgcag ccggggatga ccttcaccat cgagccgatg       720
     atcaacttgg gcgcactgga ctacgaaatc tgggacgacg gttggacggt ggtcaccaag       780
     gaccgcaagt ggaccgcaca gttcgaacac accctgctgg ttaccgatac cggcgtcgag       840
     atcctgacct gtctgtag                                                     858
//
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