EBI Dbfetch

ID   CAD95815; SV 1; linear; genomic DNA; STD; PRO; 1518 BP.
XX
PA   BX248346.1
XX
DE   Mycobacterium bovis AF2122/97 LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA
DE   LIGASE 1) (LYSRS 1) (LYSINE TRANSLASE)
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1518
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX248346.1:233664..235181)
FT                   /transl_table=11
FT                   /gene="lysS"
FT                   /locus_tag="Mb3629c"
FT                   /product="LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE
FT                   1) (LYSRS 1) (LYSINE TRANSLASE)"
FT                   /EC_number="6.1.1.6"
FT                   /note="Mb3629c, lysS, len: 505 aa. Equivalent to Rv3598c,
FT                   len: 505 aa, from Mycobacterium tuberculosis H37Rv, (100.0%
FT                   identity in 505 aa overlap). Probable lysS, lysyl-tRNA
FT                   synthetase 1 (EC 6.1.1.6), equivalent to
FT                   P46861|SYK_MYCLE|LYSS|ML0233 LYSYL-TRNA SYNTHETASE from
FT                   Mycobacterium leprae (507 aa), FASTA scores: opt: 2835,
FT                   E(): 4.5e-172, (85.45% identity in 501 aa overlap); and
FT                   similar with C-terminal part of Q9CC23|LYSX|ML1393 C-TERM
FT                   LYSYL-TRNA SYNTHASE from Mycobacterium leprae (1039 aa)
FT                   FASTA scores: opt: 1257, E(): 7.6e-72, (44.55% identity in
FT                   505 aa overlap). Also similar to others e.g.
FT                   P37477|SYK_BACSU|LYSS from Bacillus subtilis (499 aa) FASTA
FT                   scores: opt: 1294, E(): 1.9e-74, (42.35% identity in 498 aa
FT                   overlap); Q9RHV9|SYK_BACST|LYSS from Bacillus
FT                   stearothermophilus (494 aa), FASTA scores: opt: 1258, E():
FT                   3.5e-72, (41.15% identity in 498 aa overlap);
FT                   Q9PEB6|SYK_XYLFA|LYSS|XF1112 from Xylella fastidiosa (506
FT                   aa), FASTA scores: opt: 1228, E(): 2.9e-70, (43.05%
FT                   identity in 495 aa overlap); etc. Also similar to
FT                   P94974|SYK2_MYCTU|LYSS2|LYSX|Rv1640c|MTCY06H11.04c
FT                   LYSYL-TRNA SYNTHETASE 2 from Mycobacterium tuberculosis
FT                   (1172 aa), FASTA scores: opt: 1295, E(): 3.3e-74, (45.65%
FT                   identity in 506 aa overlap). Contains PS00179
FT                   Aminoacyl-transfer RNA synthetases class-II signature 1.
FT                   BELONGS TO CLASS-II AMINOACYL-TRNA SYNTHETASE FAMILY."
FT                   /db_xref="GOA:P67608"
FT                   /db_xref="HSSP:1BBW"
FT                   /db_xref="InterPro:IPR006195"
FT                   /db_xref="UniProtKB/Swiss-Prot:P67608"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD95815.1"
FT                   /translation="MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEV
FT                   RAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAAL
FT                   DAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQ
FT                   RYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSN
FT                   ALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTY
FT                   DDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQT
FT                   TVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTP
FT                   LTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLD
FT                   EDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPHSN"
XX
SQ   Sequence 1518 BP; 297 A; 452 C; 467 G; 302 T; 0 other; 2505575705 CRC32;
     gtgagtgccg ctgacacagc agaagacctt cctgagcagt tccggattcg ccgggacaag        60
     cgcgctcgct tgctggccca ggggcgcgat ccctatcccg tcgcggtgcc gcgcactcac       120
     acgttggccg aggttcgcgc cgcccaccct gacttgccga tcgataccgc gaccgaagac       180
     atcgtcggcg tcgcgggccg agtgatcttt gcgcgcaact cgggaaagct atgctttgcg       240
     acacttcagg acggcgatgg tacccagctg caagtgatga tcagcctcga caaggtcggc       300
     caggctgctc tcgacgcatg gaaagccgat gtcgacctgg gcgacatcgt ctacgtgcat       360
     ggcgcggtga tcagttcgcg ccgcggcgag ctgtccgtcc tggcggattg ctggcggatc       420
     gccgccaagt cgctgcggcc gcttcccgtc gcgcacaaag agatgagtga agagtcgcgg       480
     gttcgtcagc gctatgttga cctcatagtt cgaccggaag cgcgcgcggt ggctcgacta       540
     cggatcgccg tcgtccgcgc gatccggacg gcgcttcaac gtcgtgggtt cctggaagtc       600
     gagacgcccg tcttgcagac gttagccggt ggtgcggcgg cccgtccgtt cgccactcat       660
     tccaatgccc tagacatcga tctgtacctg cggatcgcgc cggaactgtt cctcaagcgc       720
     tgcatcgtgg gtggtttcga caaggtcttc gaacttaatc gagtgttccg aaacgaagga       780
     gccgattcca cgcattctcc ggaattctcc atgctggaga cctaccagac ctacggaacc       840
     tatgacgatt cggcagtcgt cacccgggag cttattcaag aggtggccga tgaggcgatc       900
     ggaaccagac aactgccgtt gcccgacggc agtgtctatg acatcgacgg agaatgggcg       960
     actatacaaa tgtacccgtc gctgtctgtg gcgctcggtg aagagatcac accgcagacg      1020
     acggtcgatc gcttacgtgg gatcgccgat agccttggcc tggagaaaga cccagcgatt      1080
     catgacaacc gtggcttcgg ccacggcaaa ctcatcgagg aactctggga gcgcacagtg      1140
     ggcaagagct tgagcgcacc cacatttgtc aaggattttc cggttcagac aacgcctttg      1200
     acccgtcagc accgcagtat ccccggcgta accgagaagt gggacctcta tctgcgcgga      1260
     atcgaacttg ccaccggcta ctcggaatta agcgacccgg tagtccagcg ggagagattc      1320
     gccgaccagg cccgtgccgc ggccgctggc gatgacgaag cgatggtgct tgacgaggat      1380
     tttctggccg ctctggagta cggcatgcca ccgtgcaccg gaaccggaat gggtatcgat      1440
     cggttgttga tgtctttgac tgggttgtca attagggaga cagttttgtt cccgattgtt      1500
     cgaccacact ccaactga                                                    1518
//