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EBI DbfetchID CAD95567; SV 1; linear; genomic DNA; STD; PRO; 3240 BP. XX PA BX248345.1 XX DE Mycobacterium bovis AF2122/97 PROBABLE DNA POLYMERASE III (ALPHA CHAIN) DE DNAE2 (DNA NUCLEOTIDYLTRANSFERASE) XX OS Mycobacterium bovis AF2122/97 OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Mycobacteriaceae; Mycobacterium; OC Mycobacterium tuberculosis complex. OX NCBI_TaxID=233413; XX FH Key Location/Qualifiers FH FT source 1..3240 FT /organism="Mycobacterium bovis AF2122/97" FT /strain="AF2122/97" FT /mol_type="genomic DNA" FT CDS complement(BX248345.1:292141..295380) FT /transl_table=11 FT /gene="dnaE2" FT /locus_tag="Mb3405c" FT /product="PROBABLE DNA POLYMERASE III (ALPHA CHAIN) DNAE2 FT (DNA NUCLEOTIDYLTRANSFERASE)" FT /EC_number="2.7.7.7" FT /note="Mb3405c, dnaE2, len: 1079 aa. Equivalent to Rv3370c, FT len: 1079 aa, from Mycobacterium tuberculosis strain H37Rv, FT (100.0% identity in 1079 aa overlap). Probable dnaE2, DNA FT polymerase III, alpha chain (EC 2.7.7.7), similar to many FT e.g. BAB51086|MLR4428 from Rhizobium loti (Mesorhizobium FT loti) (1118 aa), FASTA scores: opt: 1103, E(): 8.9e-59, FT (37.65% identity in 1075 aa overlap); Q9S291|SCI11.28c from FT Streptomyces coelicolor (1185 aa), FASTA scores: opt: 937, FT E(): 1e-48, (33.4% identity in 1090 aa overlap); FT O67125|DP3A_AQUAE|DNAE|AQ_1008 from Aquifex aeolicus (1161 FT aa), FASTA scores: opt: 895, E(): 3.4e-46, (29.9% identity FT in 1071 aa overlap); O51526|DP3A_BORBU from Borrelia FT burgdorferi (Lyme disease spirochete) (1147 aa), FASTA FT scores: opt: 835, E(): 1.4e-42, (30.05% identity in 888 aa FT overlap); etc. Equivalent to AAK47817 from Mycobacterium FT tuberculosis strain CDC1551 (1098 aa) but shorter 19 aa. FT Also similar to Mycobacterium tuberculosis FT DP3A_MYCTU|MTCY48.18c (29.6% identity in 1110 aa overlap). FT BELONGS TO DNA POLYMERASE TYPE-C FAMILY, DNAE SUBFAMILY." FT /db_xref="GOA:Q7TWL9" FT /db_xref="InterPro:IPR004805" FT /db_xref="UniProtKB/Swiss-Prot:Q7TWL9" FT /func_characterised="similar sequence" FT /protein_id="CAD95567.1" FT /translation="MERVLNGKPRHAGVPAFDADGDVPRSRKRGAYQPPGRERVGSSVA FT YAELHAHSAYSFLDGASTPEELVEEAARLGLCALALTDHDGLYGAVRFAEAAAELDVRT FT VFGAELSLGATARTERPDPPGPHLLVLARGPEGYRRLSRQLAAAHLAGGEKGKPRYDFD FT ALTEAAGGHWHILTGCRKGHVRQALSQGGPAAAQRALADLVDRFTPSRVSIELTHHGHP FT LDDERNAALAGLAPRFGVGIVATTGAHFADPSRGRLAMAMAAIRARRSLDSAAGWLAPL FT GGAHLRSGEEMARLFAWCPEAVTAAAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLR FT SLVMAGARERYGPPKSAPRAYSQIEHELKVIAQLRFPGYFLVVHDITRFCRDNDILCQG FT RGSAANSAVCYALGVTAVDPVANELLFERFLSPARDGPPDIDIDIESDQREKVIQYVYH FT KYGRDYAAQVANVITYRGRSAVRDMARALGFSPGQQDAWSKQVSHWTGQADDVDGIPEQ FT VIDLATQIRNLPRHLGIHSGGMVICDRPIADVCPVEWARMANRSVLQWDKDDCAAIGLV FT KFDLLGLGMLSALHYAKDLVAEHKGIEVDLARLDLSEPAVYEMLARADSVGVFQVESRA FT QMATLPRLKPRVFYDLVVEVALIRPGPIQGGSVHPYIRRRNGVDPVIYEHPSMAPALRK FT TLGVPLFQEQLMQLAVDCAGFSAAEADQLRRAMGSKRSTERMRRLRGRFYDGMRALHGA FT PDEVIDRIYEKLEAFANFGFPESHALSFASLVFYSAWFKLHHPAAFCAALLRAQPMGFY FT SPQSLVADARRHGVAVHGPCVNASLAHATCENAGTEVRLGLGAVRYLGAELAEKLVAER FT TANGPFTSLPDLTSRVQLSVPQVEALATAGALGCFGMSRREALWAAGAAATGRPDRLPG FT VGSSSHIPALPGMSELELAAADVWATGVSPDSYPTQFLRADLDAMGVLPAERLGSVSDG FT DRVLIAGAVTHRQRPATAQGVTFINLEDETGMVNVLCTPGVWARHRKLAHTAPALLIRG FT QVQNASGAITVVAERMGRLTLAVGARSRDFR" XX SQ Sequence 3240 BP; 461 A; 1118 C; 1172 G; 489 T; 0 other; 3261758687 CRC32; atggaacggg tgcttaacgg caagccgcgc catgccgggg tgccggcgtt cgacgcggat 60 ggggacgtcc cacggtcccg caagcgcggg gcgtaccagc cgccgggccg ggaacgggtc 120 ggatcgtccg tcgcgtatgc cgagctgcat gcgcattcgg cgtacagctt cctcgacggg 180 gccagcacgc ccgaggagtt ggtcgaggag gccgcccggc tgggcctgtg tgccctggcg 240 ctgaccgacc acgacggcct gtacggggcg gtgcggttcg ccgaagcggc cgcggaactc 300 gacgtgcgca cggtcttcgg cgccgagctg tcactgggcg ccacggctcg caccgagcgg 360 ccggatccgc ccggcccgca cctgctggtg ttggcccgcg gcccggaagg ctaccggcgg 420 ttgtcgcggc aactggcggc ggcgcatctg gccggcggcg aaaagggtaa gccgcgctac 480 gacttcgacg cgctaaccga ggccgccggc gggcactggc acatcctgac tggctgccgc 540 aaaggccatg tgcgccaagc gctttcccag ggtggcccgg ccgcggcgca gcgggcgctg 600 gccgatctgg tggaccggtt cacccccagc cgggtcagca tcgagctgac ccatcatggt 660 cacccgctcg acgacgaacg caacgccgcg ctggccggac tggcgccgcg cttcggtgtc 720 ggcatcgtcg ccaccaccgg ggcgcacttc gcggatccgt cacgtgggcg gctggcgatg 780 gcgatggcgg ccatccgggc ccggcggtcg ctggactccg cggccgggtg gctggctccg 840 ctgggtgggg cgcacctgcg gtccggggag gagatggccc ggttgttcgc gtggtgcccc 900 gaggcggtga ccgcggccgc cgagctcggc gagcggtgcg cctttggcct acagctcatc 960 gcgccgcggc tgccgccgtt cgatgttccc gacgggcaca ccgaggacag ctggctgcgg 1020 tcgttggtca tggcgggcgc ccgcgagcgt tacgggccgc ccaagagcgc gccccgggcg 1080 tactcccaga tcgagcatga gctgaaagtc attgcccaac tgagatttcc gggctacttc 1140 ctggtggtgc acgacatcac ccggttttgc cgggacaacg acatcctgtg tcagggcagg 1200 ggatcggcgg ccaactccgc ggtctgctat gccctgggcg tcaccgccgt cgacccggtg 1260 gccaacgagc tgttgttcga gcgcttctta tcgcccgccc gcgacgggcc acccgacatc 1320 gacatcgaca tcgagtcgga tcagcgcgaa aaggtcatcc agtacgtcta ccacaaatac 1380 ggccgcgact acgccgccca ggtcgccaac gtcatcacct accgggggcg cagcgcggtg 1440 cgtgacatgg cccgcgccct gggcttctcg ccgggccagc aggacgcgtg gagcaagcag 1500 gtcagccact ggaccgggca ggccgacgac gttgacggca tccccgagca ggtgatcgac 1560 ctggccaccc agatccgcaa cctgccgcgg cacctaggca tccactccgg cggcatggtc 1620 atctgcgacc gcccgatcgc cgacgtgtgc ccggtggaat gggcgcgcat ggccaaccgc 1680 agcgtcctgc aatgggacaa agacgactgc gcggcaatcg gcttggtgaa attcgaccta 1740 ctcgggctgg gcatgctctc ggcgctgcac tatgcgaaag acctggtggc cgagcacaag 1800 ggcatcgagg tggacctggc ccgcctcgac ctctccgagc cggcggtgta tgagatgctg 1860 gcccgcgccg attccgtcgg cgtgttccag gtggagtcac gtgcgcagat ggccaccctg 1920 ccgcgcctta agccgagagt gttctacgac ctggtggtgg aggtggcgct gatccgcccc 1980 gggcccatcc agggcggatc ggtgcacccc tacatccggc ggcgcaacgg cgtcgacccg 2040 gtcatctacg agcacccgtc gatggcgccg gcattgcgaa agacgctggg agtgccgctg 2100 tttcaggagc agctgatgca gttggcggtc gactgcgccg gcttttccgc cgccgaggcc 2160 gaccagctgc gccgcgccat ggggtctaaa cgctccaccg aacgcatgcg ccggctgcgc 2220 ggccggttct acgacggcat gcgcgcgctg cacggcgccc ccgacgaggt gatcgaccgg 2280 atctacgaaa agctggaggc gtttgccaat ttcggcttcc ccgagagcca cgcactgagt 2340 ttcgcgtcgc tggtgttcta ctcggcgtgg ttcaagctgc accacccggc ggcgttctgt 2400 gcggcgctgc tgcgcgccca gccgatgggt ttctattcgc cgcagtcgct ggtggccgac 2460 gcccgccggc acggcgtggc ggtgcacggc ccgtgtgtca atgccagcct ggcgcacgcc 2520 acgtgtgaga acgccggaac ggaggtgcgt ttgggcttgg gcgccgtccg ctacctcggc 2580 gccgagctgg ccgagaagct ggtcgcggag cgaacagcca acggcccgtt cacctccctg 2640 ccggacttga cgtcgcgggt gcagctttcc gtgccgcagg tcgaagcgct ggcgacggcc 2700 ggggcgctgg gctgcttcgg catgtctcgg cgggaggcgc tgtgggcggc cggggccgcg 2760 gccacgggcc ggccggaccg gttacccggg gtgggctcgt cgtcgcacat cccggcgctg 2820 ccggggatga gcgagctgga gctggccgcc gccgacgtgt gggccaccgg cgtctccccg 2880 gacagctatc cgacccagtt cctgcgggcg gacctggacg cgatgggggt gctgcccgcc 2940 gagaggctgg gatcggtgtc cgacggcgac cgcgtgctga tcgccggcgc ggtgactcat 3000 cggcagcgac ccgccacggc ccagggggtg acgttcatca acctcgaaga cgagaccggg 3060 atggtcaacg tgctctgcac gcccggggtg tgggcgcgac accgcaagct cgcgcacacg 3120 gcgccggcgc tgctgatccg cggccaggtc caaaacgcca gcggcgcaat caccgtcgtc 3180 gccgaacgga tgggccgcct caccctggcg gtcggcgcgc gctcgcgcga cttccggtga 3240 // |
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