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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD94980; SV 1; linear; genomic DNA; STD; PRO; 738 BP.
XX
PA   BX248343.1
XX
DE   Mycobacterium bovis AF2122/97 DIHYDRODIPICOLINATE REDUCTASE DAPB (DHPR)
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..738
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX248343.1:220678..221415)
FT                   /transl_table=11
FT                   /gene="dapB"
FT                   /locus_tag="Mb2795c"
FT                   /product="DIHYDRODIPICOLINATE REDUCTASE DAPB (DHPR)"
FT                   /EC_number="1.3.1.26"
FT                   /note="Mb2795c, dapB, len: 245 aa. Equivalent to Rv2773c,
FT                   len: 245 aa, from Mycobacterium tuberculosis strain H37Rv,
FT                   (99.2% identity in 245 aa overlap). dapB,
FT                   dihydrodipicolinate reductase (EC 1.3.1.26) (see first
FT                   citation below), highly similar to many e.g.
FT                   P40110|DAPB_CORGL from Corynebacterium glutamicum
FT                   (Brevibacterium flavum) (248 aa), FASTA scores: opt: 1030,
FT                   E(): 1.8e-58, (65.45% identity in 246 aa overlap);
FT                   O86836|DAPB_STRCO|SC9A10.03 from Streptomyces coelicolor
FT                   (250 aa), FASTA scores: opt: 997, E(): 2.3e-56, (61.15%
FT                   identity in 247 aa overlap); P42976|DAPB_BACSU from
FT                   Bacillus subtilis (267 aa), FASTA scores: opt: 608, E():
FT                   1.7e-31, (45.95% identity in 209 aa overlap);
FT                   P46829|DAPB_MYCBO from Mycobacterium bovis (see second
FT                   citation below) (271 aa), FASTA scores: opt: 505, E():
FT                   6.3e-25, (36.2% identity in 246 aa overlap); etc. BELONGS
FT                   TO THE DIHYDRODIPICOLINATE REDUCTASE FAMILY."
FT                   /db_xref="GOA:Q7TXX0"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7TXX0"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD94980.1"
FT                   /translation="MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGN
FT                   TEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPN
FT                   FAIGAVLSMHFAKQAARFFDSAEVIELHHPHKAEAPSGTAARTAKLIAEARKGLPPNPD
FT                   ATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGEILTIRHDSLDRTSFVPGVL
FT                   LAVRRIAERPGLTVGLEPLLDLH"
XX
SQ   Sequence 738 BP; 133 A; 237 C; 238 G; 130 T; 0 other; 1552078556 CRC32;
     atgcgggtag gcgtccttgg agccaaaggc aaggtcggag cgacgatggt gcgggcggtg        60
     gcggccgccg acgacctgac cctatccgcc gagctggatg ccggcgatcc gctgagcctg       120
     ctaacggacg gtaacaccga ggtcgtcatc gacttcaccc acccggacgt ggtgatgggc       180
     aatctggagt tcctcatcga caacggaatt cacgccgtgg tcggtaccac ggggttcacc       240
     gccgagcggt ttcaacaagt cgaatcgtgg ctcgtcgcaa aacccaacac atcggtgttg       300
     atagcgccaa acttcgcgat cggagcggtg ctgtccatgc atttcgccaa gcaggccgca       360
     cggtttttcg actcggccga ggtcattgag ctgcatcatc cgcacaaggc tgaagcgccg       420
     tcaggcacgg ccgcgcgtac cgcgaagctg atcgccgagg cccgaaaagg cttgccgccc       480
     aatcccgatg ccaccagtac cagcctgccg ggcgcgcgtg gtgccgacgt cgacggcata       540
     ccggtgcacg cggtgcggct ggccggactg gtcgcccacc aggaggtgct gttcgggacc       600
     gagggggaga ttctgaccat ccgccacgat agcctcgatc gcacatcgtt tgtgcccggt       660
     gtgctgttgg cggtgcgccg catcgccgaa cgccctggtc tcaccgtagg tcttgagccc       720
     ctactcgatc tgcactga                                                     738
//
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