spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD94905; SV 1; linear; genomic DNA; STD; PRO; 873 BP.
XX
PA   BX248343.1
XX
DE   Mycobacterium bovis AF2122/97 POSSIBLE EXTRAGENIC SUPPRESSOR PROTEIN SUHB
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..873
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX248343.1:154999..155871)
FT                   /transl_table=11
FT                   /gene="suhB"
FT                   /locus_tag="Mb2720c"
FT                   /product="POSSIBLE EXTRAGENIC SUPPRESSOR PROTEIN SUHB"
FT                   /note="Mb2720c, suhB, len: 290 aa. Equivalent to Rv2701c,
FT                   len: 290 aa, from Mycobacterium tuberculosis strain H37Rv,
FT                   (100.0% identity in 290 aa overlap). Possible suhB,
FT                   extragenic suppressor protein, equivalent to
FT                   P46813|SUHB_MYCLE|SUHB|SSYA|ML1024 EXTRAGENIC SUPPRESSOR
FT                   PROTEIN from Mycobacterium leprae (291 aa), FASTA scores:
FT                   opt: 1424, E(): 4.9e-78, (77.55% identity in 294 aa
FT                   overlap). Similar (except at N-terminus) to others e.g.
FT                   O54128|SUHB from Streptomyces coelicolor (209 aa), FASTA
FT                   scores: opt: 560, E(): 1.7e-26, (46.95% identity in 213 aa
FT                   overlap); Q9CNV8|SUHB|PM0315 from Pasteurella multocida
FT                   (267 aa), FASTA scores: opt: 479, E(): 1.5e-21, (39.3%
FT                   identity in 234 aa overlap); P44333|SUHB_HAEIN|HI0937 from
FT                   Haemophilus influenzae (267 aa), FASTA scores: opt: 438,
FT                   E(): 4.1e-19, (34.7% identity in 248 aa overlap);
FT                   P22783|SUHB_ECOLI|SSYA|B2533 from Escherichia coli strain
FT                   K12 (267 aa), FASTA scores: opt: 419, E(): 5.7e-18, (34.45%
FT                   identity in 267 aa overlap); etc. And also similar to
FT                   putative myo-inositol-1(or 4)-monophosphatases e.g.
FT                   Q9S1M1|SPCA from Streptoverticillium netropsis
FT                   (Streptoverticillium flavopersicus) (266 aa), FASTA scores:
FT                   opt: 556, E(): 3.6e-26, (45.4% identity in 240 aa overlap);
FT                   Q9S3X5|SPCA from Streptomyces spectabilis (264 aa), FASTA
FT                   scores: opt: 502, E(): 6.1e-23, (46.05% identity in 265 aa
FT                   overlap); CAC47357 from Rhizobium meliloti (Sinorhizobium
FT                   meliloti) (266 aa), FASTA scores: opt: 452, E(): 6e-20,
FT                   (38.5% identity in 244 aa overlap); etc. Equivalent to
FT                   AAK47090 from Mycobacterium tuberculosis strain CDC1551
FT                   (277 aa) but longer 13 aa. Contains PS00630 Inositol
FT                   monophosphatase family signatures 1 and 2 (PS00629 and
FT                   PS00630). BELONGS TO THE INOSITOL MONOPHOSPHATASE FAMILY."
FT                   /db_xref="GOA:P65166"
FT                   /db_xref="HSSP:1IMD"
FT                   /db_xref="InterPro:IPR000760"
FT                   /db_xref="UniProtKB/Swiss-Prot:P65166"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD94905.1"
FT                   /translation="MTRPDNEPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGA
FT                   VRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLD
FT                   PIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHV
FT                   LRCTGVDELSMALLGTGFGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGR
FT                   LDAYYEHGVQVWDCAAGALIAAEAGARVLLSTPRAGGAGLVVVAAAPGIADELLAALQR
FT                   FNGLEPIPD"
XX
SQ   Sequence 873 BP; 117 A; 255 C; 341 G; 160 T; 0 other; 1392863228 CRC32;
     gtgacacgac ctgacaacga acccgcgcgg ctgcgctctg tggccgaaaa ccttgctgcc        60
     gaggcggcgg ccttcgttcg cggtcgtcgg gccgaggttt tcggcatctc cagggcgggc       120
     gacggcgacg gcgcggtgcg cgcgaagagc agcccgaccg atccggtgac cgtggtcgac       180
     accgacacgg agcggctctt gcgtgatcgg ttggctcaac ttcggcccgg tgacccgatt       240
     ctcggggagg aaggtggtgg tcccgccgac gtgacggcta caccctccga ccgggtcact       300
     tgggtgctcg accccatcga cggcacggtg aatttcgtct acggcatccc ggcgtacgcg       360
     gtgtcgattg gggcacaggt tggcggcatc acggtggcgg gcgcggtcgc cgacgtcgcc       420
     gctcgcacgg tgtattcggc ggcgacgggc ctcggcgcac atctcaccga tgagcggggg       480
     agacatgtgt tgcggtgcac cggtgtcgac gagttgtcga tggcgttgct gggtaccggc       540
     ttcgggtact cggttcggtg ccgcgagaag caggcagaat tgctggctca tgttgtgccg       600
     ttggtccgcg acgtgcgtcg gatcggttct gcggcgctgg acttgtgcat ggtagcggcg       660
     ggtcggctgg acgcctacta cgagcacggg gtgcaggtgt gggactgtgc ggcaggtgcg       720
     ttgatcgccg ctgaggcggg ggcccgcgtg ttgttgtcaa cgccgagagc gggcggcgcg       780
     gggttggtgg tggtggctgc cgcgcccgga atcgccgacg agctgttggc ggcgctacag       840
     cgattcaacg gcctagagcc gatcccggac tga                                    873
//
spacer
spacer