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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD94462; SV 1; linear; genomic DNA; STD; PRO; 1557 BP.
XX
PA   BX248340.1
XX
DE   Mycobacterium bovis AF2122/97 POSSIBLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE
DE   [NADP+] DEPENDANT (SSDH) GABD2
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1557
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             BX248340.1:29074..30630
FT                   /transl_table=11
FT                   /gene="gabD2"
FT                   /locus_tag="Mb1760"
FT                   /standard_name="gabD1"
FT                   /product="POSSIBLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE
FT                   [NADP+] DEPENDANT (SSDH) GABD2"
FT                   /EC_number="1.2.1.16"
FT                   /note="Mb1760, gabD2, len: 518 aa. Equivalent to Rv1731,
FT                   len: 518 aa, from Mycobacterium tuberculosis strain H37Rv,
FT                   (100% identity in 518 aa overlap). Possible gabD2,
FT                   succinate-semialdehyde dehydrogenase [NADP+] dependent (EC
FT                   1.2.1.16), similar to others e.g. GABD_ECOLI|P25526
FT                   succinate-semialdehyde dehydrogenase from Escherichia coli
FT                   (482 aa), FASTA scores: opt: 870, E(): 0, (34.7% identity
FT                   in 449 aa overlap); etc. Also similar to
FT                   gabD1|Rv0234c|MTCY08D5.30c PROBABLE SUCCINATE-SEMIALDEHYDE
FT                   DEHYDROGENASE [NADP+] DEPENDANT from Mycobacterium
FT                   tuberculosis (511 aa); and other semialdehyde
FT                   dehydrogenases e.g. Rv0768|aldA (489 aa), Rv2858c|aldC (455
FT                   aa), etc. Contains PS00216 Sugar transport proteins
FT                   signature 1, PS00687 Aldehyde dehydrogenases glutamic acid
FT                   active site. BELONGS TO THE ALDEHYDE DEHYDROGENASES FAMILY.
FT                   Note that previously known as gabD1."
FT                   /db_xref="GOA:Q7TZP3"
FT                   /db_xref="HSSP:1BXS"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7TZP3"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD94462.1"
FT                   /translation="MPAPSAEVFDRLRNLAAIKDVAARPTRTIDEVFTGKPLTTIPVGT
FT                   AADVEAAFAEARAAQTDWAKRPVIERAAVIRRYRDLVIENREFLMDLLQAEAGKARWAA
FT                   QEEIVDLIANANYYARVCVDLLKPRKAQPLLPGIGKTTVCYQPKGVVGVISPWNYPMTL
FT                   TVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAIT
FT                   DNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACF
FT                   SNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVS
FT                   GHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEMECAANETFGPVVSIYPVAD
FT                   VDEAVEKANDTDYGLNASVWAGSTAEGQRIAARLRSGTVNVDEGYAFAWGSLSAPMGGM
FT                   GLSGVGRRHGPEGLLKYTESQTIATARVFNLDPPFGIPATVWQKSLLPIVRTVMKLPGR
FT                   R"
XX
SQ   Sequence 1557 BP; 279 A; 503 C; 521 G; 254 T; 0 other; 3140229344 CRC32;
     atgcctgcac cctcggccga ggttttcgat cgcttgcgta acctggccgc gatcaaggac        60
     gtcgccgcac gtccgaccag gacgatcgac gaggtcttca ccggcaagcc gttgactacg       120
     attccggtcg gcacggccgc ggacgtcgaa gcggcattcg ccgaagctcg cgcggcgcag       180
     accgactggg cgaagcgtcc cgtcatcgag cgagctgcag tcatccgccg ctatcgcgac       240
     ctggtcatcg agaaccgcga gttcctcatg gacctcctgc aagccgaggc gggcaaggcc       300
     cgatgggcgg cgcaagagga aattgtcgat ctgatcgcga acgcgaatta ttacgcacga       360
     gtctgtgtgg acctgctgaa gccccgtaag gcacagccgc tgctgcccgg gataggcaag       420
     accacggtgt gctatcaacc gaagggcgtg gtgggggtga tctcgccgtg gaactacccc       480
     atgacgctta cggtgtcgga ctcggtgccc gcgctggtgg ccggtaacgc ggtggtgctc       540
     aagccggaca gccagacgcc gtattgtgcg ctcgcgtgtg ccgagctgct gtatcgggcg       600
     ggtctgccgc gagcgctgta tgcgatcgtg cccggtccgg gctcggtggt gggcaccgcc       660
     atcaccgaca actgcgacta cctgatgttc accggttcat cggcgaccgg cagccgcctc       720
     gccgagcacg ccggccgccg gcttatcggt ttctcggccg aacttggcgg caagaacccc       780
     atgatcgtgg cgcggggtgc caacctcgac aaggtcgcca aggcggccac ccgtgcctgc       840
     ttctcgaacg ccggccagct gtgcatctcc attgagcgga tctacgtcga aaaggacatc       900
     gccgaggagt tcacccggaa gttcggcgat gcggtgcgga acatgaagct cggcaccgca       960
     tacgacttct cggtcgacat gggtagtttg atctccgaag cacagctgaa aaccgtgtcc      1020
     ggtcacgtgg atgacgcgac ggccaagggc gccaaggtga ttgcgggcgg caaggctcga      1080
     cccgacatcg ggccgctgtt ctacgagccg accgtgctga ccaacgtcgc acccgaaatg      1140
     gaatgcgcgg ccaacgagac gttcgggccg gtggtctcga tctacccggt cgccgacgtg      1200
     gacgaagccg tcgaaaaggc caacgacacc gactacgggc tcaacgccag cgtctgggcc      1260
     ggctccaccg cggagggcca gaggatcgcc gcccggctgc ggtcggggac ggtgaacgtc      1320
     gacgaggggt acgcgttcgc ctggggcagc ctcagcgcgc cgatgggcgg gatgggcctc      1380
     tcgggggtcg gccgccggca cggtccggag ggcttgctca agtacaccga atcacagacg      1440
     atcgcgaccg cccgcgtgtt caatctcgat ccgcccttcg gcatcccggc cacagtctgg      1500
     cagaagtcac tgttacccat cgtgcgcacc gtgatgaagc ttcccggccg caggtga         1557
//
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