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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD93989; SV 1; linear; genomic DNA; STD; PRO; 1425 BP.
XX
PA   BX248337.1
XX
DE   Mycobacterium bovis AF2122/97 PROBABLE FUMARASE FUM (Fumarate hydratase)
XX
OS   Mycobacterium bovis AF2122/97
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium tuberculosis complex.
OX   NCBI_TaxID=233413;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1425
FT                   /organism="Mycobacterium bovis AF2122/97"
FT                   /strain="AF2122/97"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX248337.1:240513..241937)
FT                   /transl_table=11
FT                   /gene="fum"
FT                   /locus_tag="Mb1128c"
FT                   /product="PROBABLE FUMARASE FUM (Fumarate hydratase)"
FT                   /EC_number="4.2.1.2"
FT                   /note="Mb1128c, fum, len: 474 aa. Equivalent to Rv1098c,
FT                   len: 474 aa, from Mycobacterium tuberculosis strain H37Rv,
FT                   (100% identity in 474 aa overlap). Probable fum, fumarase
FT                   (EC 4.2.1.2). Equivalent to AL049491|MLCB1222_11
FT                   Mycobacterium leprae (474 aa) (89.5 % identity in 467 aa
FT                   overlap). Similar to many e.g. P14408|FUMH_RAT FUMARATE
FT                   HYDRATASE, MITOCHONDRIAL PRECURSOR from Rattus norvegicus
FT                   (507 aa), FASTA scores: opt: 1427, E(): 0, (52.3% identity
FT                   in 461 aa overlap); and P05042|FUMC_ECOLI Fumarate
FT                   hydratase class II from Escherichia coli (467 aa), FASTA
FT                   scores: opt: 1355, E(): 0, (50.2% identity in 444 aa
FT                   overlap). Contains PS00163 Fumarate lyases signature.
FT                   TBparse score is 0.886."
FT                   /db_xref="GOA:Q7U0N6"
FT                   /db_xref="InterPro:IPR000362"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7U0N6"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD93989.1"
FT                   /translation="MAVDADSANYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRG
FT                   LERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGS
FT                   GTSSNMNTNEVIASIAAKGGVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLIPAL
FT                   QQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLG
FT                   ELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGAL
FT                   RTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQV
FT                   IGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLR
FT                   RLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIEDLDRRL
FT                   DVLAMAKAEQLDSDRL"
XX
SQ   Sequence 1425 BP; 269 A; 470 C; 465 G; 221 T; 0 other; 3120753083 CRC32;
     atggccgttg acgccgacag cgccaattac cgcatcgagc acgacaccat gggcgaagtc        60
     cgggtgccgg caaaagcgtt gtggcgcgcg caaacccagc gcgcggtgga gaacttcccg       120
     atatccggcc gcgggttgga gcgcacccag atccgcgcgc taggcctgct gaaaggcgcc       180
     tgcgcgcagg tgaactccga cctcgggttg ctggcgccgg agaaagccga cgccatcatc       240
     gccgcggccg ccgagatcgc cgacggtcaa cacgacgacc agtttcccat cgacgtcttc       300
     cagaccggct cgggcaccag ctccaacatg aacaccaacg aggtgattgc gtccatcgcg       360
     gccaagggcg gggtcacgtt gcatcccaac gacgacgtga acatgtcgca gtcgtccaac       420
     gacaccttcc cgacggccac ccacatcgcg gccaccgagg ccgcggtcgc tcatctcatc       480
     ccagcgctgc agcagctgca cgacgcattg gccgccaagg ctcttgattg gcacacggtg       540
     gtgaagtcgg gccgaacgca tctgatggac gccgttccgg tgacactcgg ccaggagttc       600
     agcggatatg cccgccagat cgaggccggc atcgagcggg tgcgcgcgtg tctgcccagg       660
     ctgggcgagc tggcgatcgg cggcaccgcg gtgggtaccg gcctcaacgc tcccgacgac       720
     ttcggcgtca gagtggtcgc ggtgctggtc gcgcagaccg gtctgtcgga attgcgtacg       780
     gcggctaatt ctttcgaagc tcaggctgcc cgcgacgggc tggtggaggc gtccggggcg       840
     ctgcgcacga tcgcggtatc gctgaccaag atcgccaacg acatccgctg gatgggatcg       900
     ggcccattga ccggcctggc cgagatccaa ctgccagatc tgcagccggg cagctcgatc       960
     atgccgggaa aggtgaatcc ggttctgccg gaggcggtta cgcaggtcgc cgcgcaggtg      1020
     atcggaaacg acgccgccat cgcctggggt ggggccaacg gcgcattcga actcaacgtc      1080
     tacatcccga tgatggcccg caacatcctc gagtccttca agctgctgac caatgtgtca      1140
     cggctgttcg cccagcgctg catagcaggg ctgaccgcca acgtcgagca cctgcggcgg      1200
     ctggccgagt cctcaccgtc gatcgtgaca ccgttgaatt cggccatcgg ctacgaggag      1260
     gcggccgccg tcgccaagca agcactcaag gaacgcaaaa cgattcgcca aaccgtgatc      1320
     gaccgtggcc tgatcggcga caggctgtcg atcgaggatc tggaccgccg tctggacgtg      1380
     ctggcaatgg ccaaggccga gcagctcgac agcgatcggc tatga                      1425
//
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