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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD78174; SV 1; linear; genomic DNA; STD; PRO; 1602 BP.
XX
PA   BX294141.1
XX
DE   Rhodopirellula baltica SH 1 F0F1-ATPase alpha chain
XX
OS   Rhodopirellula baltica SH 1
OC   Bacteria; Planctomycetes; Planctomycetacia; Planctomycetales;
OC   Planctomycetaceae; Rhodopirellula.
OX   NCBI_TaxID=243090;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1602
FT                   /organism="Rhodopirellula baltica SH 1"
FT                   /strain="1"
FT                   /mol_type="genomic DNA"
FT   CDS             BX294141.1:93412..95013
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="atpA"
FT                   /locus_tag="RB4916"
FT                   /product="F0F1-ATPase alpha chain"
FT                   /function="ATP synthesis proteins"
FT                   /EC_number="3.6.3.14"
FT                   /note="PMID: 98086367 best DB hits: BLAST: pir:JC5797;
FT                   F0F1-ATPase (EC 3.4.-.-) alpha chain - Methanosarcina;
FT                   E=1e-146 swissprot:O66907; ATPA_AQUAE ATP SYNTHASE ALPHA
FT                   CHAIN -----; E=1e-124 pir:F72231; ATP synthase F1, subunit
FT                   alpha - Thermotoga maritima; E=1e-123 COG: aq_679; COG0056
FT                   F0F1-type ATP synthase alpha subunit; E=1e-125 PFAM:
FT                   PF02874; ATP synthase alpha/beta family,; E=1.1e-10
FT                   PF00006; ATP synthase alpha/beta family,; E=1.3e-122
FT                   PF00306; ATP synthase alpha/beta chain,; E=3.4e-21"
FT                   /db_xref="GOA:Q7UH05"
FT                   /db_xref="InterPro:IPR000194"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7UH05"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAD78174.1"
FT                   /translation="MPKSDETIDSFNDDVSLPPRLAAVHPQSIMTTYSETLETAAQQFD
FT                   QAVKSQPSQLTVTEIGTVEEVQRGIARVHGLPHVQVDEVLRFAGGHLGYAFNLDPDQVG
FT                   CVLLDSSDQITAGSRVERMHSVLDTPVGDQLLGRVVDPVGRPLDGGRSLDDLPREPCER
FT                   DAPPIMQRAPVTVPLQSGLKVVDAMIPIGRGQRQLLLGDRQTGKTAIAIDTIINQLGRD
FT                   VICIYCSIGQRSTGVARVIENLRRHDALDHTIVVIGADDAPPGLQFLAPYAATTMGEHF
FT                   MRQGRDVMIVYDDLTSHARAYRHLSLLLRRPPGREAFPGDIFYVHSRLLERSTHLIQSA
FT                   GGGSLTALPIIETEAQNVSAYIPTNLISITDGQIYLSPTLFRKGVLPAIDVGRSVSRVG
FT                   GKTQLPAYRVVAGDLRLTYSQFEELERFARFSSQLDEDTRATLDRGRLIREILKQTQFQ
FT                   PLTLPQQIASLIAVTNGVLDGVPVDQLPTIERAIQDAVTSQANDLCAQMQSGKKLDKQQ
FT                   VGQIANIAAGAVHAHA"
XX
SQ   Sequence 1602 BP; 348 A; 461 C; 453 G; 340 T; 0 other; 3667947625 CRC32;
     gtgccgaagt cggatgagac aatcgactct ttcaacgatg acgtgtcgct tccgccaaga        60
     ctcgccgctg tgcaccccca atcgatcatg accacctatt cagaaacgct tgaaaccgcc       120
     gctcagcaat ttgatcaagc ggtcaaatcg caacccagcc aactgaccgt caccgaaatc       180
     ggcaccgtcg aagaggtcca gcgcgggatc gcacgcgttc acggtttgcc acacgttcag       240
     gtcgatgaag tgcttcggtt tgctggtggt catcttggtt acgcgttcaa cttggatccc       300
     gaccaagtcg gttgtgtgtt attggattcc agcgatcaga tcaccgcagg ttcgcgggtg       360
     gagcgaatgc actcggtgct ggacacaccc gttggcgacc agttgctcgg ccgcgtggtg       420
     gacccggtgg gtcggccttt ggacggtggc cgttcgcttg atgatctacc acgcgaacct       480
     tgcgaacgcg acgcgccgcc gattatgcaa cgtgctccgg tgacggttcc gttgcaatcg       540
     gggctgaaag ttgttgacgc gatgattccg atcgggcgtg gccaacggca actgctactc       600
     ggcgatcgcc aaacgggcaa gactgcaatt gcgatcgaca cgatcatcaa ccaactcggc       660
     cgcgatgtga tttgcatcta ttgcagcatc ggtcaacgaa gcacaggcgt cgctcgcgtg       720
     atcgaaaact tgcgtcgtca cgacgccttg gaccacacga tcgtggtcat cggtgctgat       780
     gacgccccgc cagggttgca gttccttgct ccatacgcgg caacgacgat gggtgagcac       840
     ttcatgcgac agggccgtga cgtcatgatt gtctacgatg acctgacatc ccacgcgaga       900
     gcataccgcc acctgtcatt gctgctgcgg cgcccgccag gtcgagaggc atttccgggc       960
     gacatctttt acgttcactc acggttgctg gaacggtcca cgcacttgat ccaaagtgct      1020
     ggcggaggct cgttgacggc acttcccatc attgaaacgg aagcccaaaa cgtttcggcc      1080
     tacataccga caaatctgat ttcgatcacg gacggccaaa tctacctctc gcccacgttg      1140
     tttcgaaagg gcgtgttgcc cgcgatcgat gttggacgca gcgtgtctcg cgtgggtggc      1200
     aaaactcaac tgcccgccta ccgagtcgtg gcgggtgact tgcgattgac atactcgcaa      1260
     ttcgaagaac tggaacgatt tgctcgcttc agcagtcaac tcgacgagga cacccgcgca      1320
     acactcgatc gcggacgatt gattcgcgaa atattgaagc agacacagtt tcagccgctc      1380
     acgttgccgc aacagattgc ttcgttgata gcggtgacca atggcgtatt ggatggcgtt      1440
     cccgtggacc aacttccgac gattgaacgt gcgattcaag atgcggtgac gtcgcaagcg      1500
     aatgatttgt gtgcgcaaat gcagtcgggg aaaaagctcg acaaacaaca ggtaggacag      1560
     atcgccaaca tcgctgccgg agcggttcat gcccacgctt ga                         1602
//
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