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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD67124; SV 1; linear; genomic DNA; STD; PRO; 1353 BP.
XX
PA   BX251411.1
XX
DE   Tropheryma whipplei TW08/27 cysteinyl-tRNA synthetase
XX
OS   Tropheryma whipplei TW08/27
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Micrococcineae; Tropheryma.
OX   NCBI_TaxID=218496;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1353
FT                   /organism="Tropheryma whipplei TW08/27"
FT                   /strain="TW08/27"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(BX251411.1:169213..170565)
FT                   /transl_table=11
FT                   /gene="cysS2"
FT                   /locus_tag="TW456"
FT                   /product="cysteinyl-tRNA synthetase"
FT                   /EC_number="6.1.1.16"
FT                   /note="Similar to Escherichia coli cysteinyl-tRNA
FT                   synthetase CysS or b0526 SWALL:SYC_ECOLI (SWALL:P21888)
FT                   (461 aa) fasta scores: E(): 2e-23, 32.06% id in 315 aa, and
FT                   to Streptomyces coelicolor putative cysteinyl-trna
FT                   synthetase sco1663 or sci52.05C SWALL:Q9ADA4
FT                   (EMBL:AL590507) (409 aa) fasta scores: E(): 6e-44, 40.22%
FT                   id in 348 aa"
FT                   /db_xref="GOA:Q83HQ8"
FT                   /db_xref="HSSP:1LI5"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q83HQ8"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD67124.1"
FT                   /translation="MYTFEVFDSRTRSIVKLEDCLLRLYVCGITPYKSTHLGHAFTYVG
FT                   FDTLFRLALDSGRDVLYIQNISDIDEPLFQYAEKVGIHYKDLARTQTKRFFEDMHTLEC
FT                   LPPGYVIPVSKVLDGIKTGIEGLISRNMAYKLPNGDVYFDSTLTDPGKMFCFDRKTAMS
FT                   LMLETDTGKNPFDPLLWRGRGAEPQWEASFGAGRPAWHISCAVLSNLQTQYENVLHIYG
FT                   GGRDLAFPHHEFTNVLSKLIRAPKDNKQQDTVQDVFMHTGLVSYMGDKMSKSKGNLVFI
FT                   SQLREQCEKIGLHHSVIRLALLQRHYREDWEWQDECLDRAASRFRLWKSALQEYIGAKG
FT                   IRSTADQNKGTQGAWERIHGGVFDSNFDHRQPIHPKHSPQMRDYSEHGSAGQNGTDLDL
FT                   SLYQAIRFHLCNDLDTPKALDAVDSYARKGTITIPEARAVEKLLGIPLTRV"
XX
SQ   Sequence 1353 BP; 380 A; 269 C; 331 G; 373 T; 0 other; 3297636605 CRC32;
     ttgtacacat ttgaggtgtt tgattcacgg accaggtcta ttgtaaaact tgaagattgc        60
     ttactgcgct tatacgtctg tggaataacc ccgtacaaat caactcatct cggacacgcg       120
     tttacgtatg tgggctttga tacactgttt cgtttggcgt tggactctgg tagagatgtt       180
     ctgtacattc aaaatataag tgatatcgat gagcctctat ttcaatacgc agagaaagtt       240
     ggtattcatt acaaagacct ggccagaacc cagaccaagc gtttttttga agatatgcat       300
     actcttgagt gccttccgcc aggttatgtt attcccgttt cgaaggttct agacggaata       360
     aaaacaggca tagagggtct tatcagtcgt aatatggcat acaaactgcc taatggagat       420
     gtatattttg attcaacctt aactgatccg ggaaaaatgt tttgttttga cagaaaaaca       480
     gccatgagtt tgatgcttga aacagataca ggtaaaaacc catttgaccc gcttttgtgg       540
     agggggcgcg gcgcagagcc acaatgggag gcatcttttg gtgcggggag acccgcatgg       600
     catatttcat gcgctgtcct atcaaattta cagacacaat acgaaaatgt gcttcatatc       660
     tatggtgggg gccgtgatct tgctttcccg catcatgaat ttacaaatgt attatccaaa       720
     ttgattcgtg cgccaaagga taataagcaa caggatactg tgcaagatgt atttatgcat       780
     accggacttg tgtcgtatat gggggacaag atgtcgaagt caaagggcaa tcttgtattt       840
     atctcacaat tacgcgagca atgcgaaaaa attggcctgc atcactcagt tatccggtta       900
     gcgctgttgc aaagacacta cagagaggat tgggagtggc aggatgagtg tcttgatcgg       960
     gcggcttcca ggttcagact ctggaagagt gcgttacaag aatatattgg ggcgaagggt      1020
     attaggtcta ccgcagatca aaataaaggc acgcaaggag cctgggagcg tattcacggt      1080
     ggcgtatttg acagcaattt tgaccacagg cagcccattc atcctaaaca ttcacctcaa      1140
     atgagggatt attctgagca tggtagtgcg gggcagaacg gtacagactt agatctaagt      1200
     ctgtatcagg caatacgatt tcatctctgc aatgatcttg atactccaaa ggcccttgat      1260
     gctgttgata gctacgcacg aaaaggtaca ataactattc cggaagctcg cgcagtcgag      1320
     aaattgttgg gaattcctct gactcgcgtc tga                                   1353
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