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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD55444; SV 1; linear; genomic DNA; STD; PRO; 735 BP.
XX
PA   AL939105.1
XX
DE   Streptomyces coelicolor secreted chitinase
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..735
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             AL939105.1:203342..204076
FT                   /transl_table=11
FT                   /gene="SCO0482"
FT                   /gene_synonym="chiG"
FT                   /gene_synonym="SCF34.01"
FT                   /product="secreted chitinase"
FT                   /note="SCF80.03, secreted chitinase, partial CDS, len:> 187
FT                   aa. Previously sequenced and characterised. Streptomyces
FT                   coelicolor TR:Q9Z9M4 (EMBL; AB017013) chiG (fragment) (244
FT                   aa), fasta scores opt: 1238 z-score: 1463.2 E():0 98.9%
FT                   identity in 187 aa overlap. Contains a possible N-terminal
FT                   signal sequence and a Pfam match to entry PF00182
FT                   Glyco_hydro_19, Chitinases class I."
FT                   /note="SCF34.01, chiG, chitinase, partial CDS, len: >90 aa;
FT                   identical to the C-terminus of TR:Q9Z9M4 (EMBL:AB017013),
FT                   chiG, Streptomyces coelicolor chitinase (fragment) (244
FT                   aa), fasta scores; opt: 638 z-score: 812.8 E(): 0, 100.0%
FT                   identity in 90 aa overlap. Highly similar to SC5H1.29c
FT                   (EMBL:AL049863), chiF, Streptomyces coelicolor chitinase
FT                   (296 aa) (81.1% identity in 90 aa overlap). Contains Pfam
FT                   match to entry PF00182 Glyco_hydro_19, Chitinases class I"
FT                   /db_xref="GOA:Q8CK55"
FT                   /db_xref="InterPro:IPR000726"
FT                   /db_xref="PDB:2CJL"
FT                   /db_xref="UniProtKB/TrEMBL:Q8CK55"
FT                   /protein_id="CAD55444.1"
FT                   /translation="MQHRKLALLAATGAAAALCTLTMAPSAVAEKSDTRTAAAEFVVSE
FT                   AQFDQMFPSRNSFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYV
FT                   VEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLV
FT                   QNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQS
FT                   RIDNYERFTQLLGVEPGGNLSC"
XX
SQ   Sequence 735 BP; 138 A; 276 C; 227 G; 94 T; 0 other; 824837359 CRC32;
     gtgcagcacc gcaagctcgc gctgctggcc gccaccggtg cggccgccgc cctgtgcacg        60
     ctgaccatgg cgccgtcggc cgtcgccgag aagtccgaca cccggaccgc cgccgccgaa       120
     ttcgtggtca gcgaagccca gttcgaccaa atgttcccga gccggaactc cttctacacc       180
     tacagcggcc tcaccgccgc gctcagcgcc tacccggggt tctcgaacac cggcagcgac       240
     accgtgaaga agcaggaggc cgccgccttc ctcgccaacg tcggccacga gaccggcggg       300
     ctggtgtacg tggtggagca gaacaccgcc aactacccgc actactgcga cgcgtcccag       360
     ccgtacggct gcccggccgg caacgacaag tactacgggc gcgggcccgt ccagctgagc       420
     tggaacttca actacaaggc cgccggggac gccctcggca tcgatctgct caacaacccc       480
     gacctggtcc agaacgactc ggccgtggcc tggaagacgg gcctgtggta ctggaacacc       540
     cagaccggac ccggcaccat gaccccgcac gacgccatgg tcaacggcgc cgggttcggc       600
     gagaccatcc ggtccatcaa cggcagcctg gagtgcgacg ggggcaatcc cgggcaggtc       660
     cagagccgga tcgacaacta cgagcgcttc acccagctcc tcggtgtcga gcccggcggc       720
     aacctgagct gttag                                                        735
//
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